Gene detail information of Glyur000191s00015644.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G24630.1 | 5.00E-124 | DHHC-type zinc finger family protein |
| NR | XP_003592069.1 | 0 | Palmitoyltransferase SWF1 [Medicago truncatula] |
| Swissprot | tr|Q9SB58|ZDH19_ARATH | 9.00E-153 | Protein S-acyltransferase 8 |
| trEMBL | tr|G7IBW6|G7IBW6_MEDTR | 0 | S-acyltransferase {ECO:0000256|RuleBase:RU079119} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00191 | 246506 | 247940 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| K16675 | ZDHHC9_14_18 | EC:2.3.1.225 | Hippo signaling pathway -fly | map04391 |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000191s00015644.1 | PF01529.15 | zf-DHHC | 5 | 189 | 2.10E-42 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 5.057 |
| SRR1783600 | control | 5.042 |
| SRR1783602 | moderate drought stress | 5.713 |
| SRR1811619 | moderate drought stress | 6.512 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 4.426 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 5.093 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 3.700 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 3.405 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 7.788 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 7.094 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.678 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.942 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 11.604 |
| SRR2868004 | Drought Stress(Tissue:root) | 9.680 |
| SRR2967015 | Control (Tissue:root) | 11.498 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 4.029 |
| SRR9715740 | Leave | 4.271 |
| SRR9715741 | Leave | 3.953 |
| SRR9715739 | Root | 5.176 |
| SRR9715742 | Root | 5.633 |
| SRR9715743 | Root | 6.670 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 14.870 |
| SRR8749028 | MeJA induced 9h | 14.869 |
| SRR8749029 | MeJA induced 9h | 15.150 |
| SRR8749030 | Uninduced | 10.044 |
| SRR8749031 | Uninduced | 13.324 |
| SRR8749032 | Uninduced | 15.657 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 9.136 |
| SRR8400027 | Control-Root | 10.821 |