Gene detail information of Glyur000192s00009308.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G09840.60shaggy-like protein kinase 41
NRXP_004485442.10PREDICTED: shaggy-related protein kinase kappa-like [Cicer arietinum]
COGYP_004267788.14.00E-21serine/threonine protein kinase [Planctomyces brasiliensis DSM 5305]
Swissprottr|Q39019|KSG10_ARATH0Shaggy-related protein kinase kappa
trEMBLtr|A0A067D9R2|A0A067D9R2_CITSI0Uncharacterized protein {ECO:0000313|EMBL:KDO39704.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold001921117917296+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:4.5.4


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K03083GSK3B EC:2.7.11.26 ErbB signaling pathway map04012
Wnt signaling pathwaymap04310
Hedgehog signaling pathwaymap04340
Hedgehog signaling pathway - flymap04341
Hippo signaling pathwaymap04390
PI3K-Akt signaling pathwaymap04151
mTOR signaling pathwaymap04150
Cell cyclemap04110
Focal adhesionmap04510
Signaling pathways regulating pluripotency of stem cellsmap04550
T cell receptor signaling pathwaymap04660
IL-17 signaling pathwaymap04657
B cell receptor signaling pathwaymap04662
Chemokine signaling pathwaymap04062
Insulin signaling pathwaymap04910
Prolactin signaling pathwaymap04917
Thyroid hormone signaling pathwaymap04919
Melanogenesismap04916
Dopaminergic synapsemap04728
Neurotrophin signaling pathwaymap04722
Axon guidancemap04360
Circadian rhythm - flymap04711
Pathways in cancermap05200
Colorectal cancermap05210
Basal cell carcinomamap05217
Prostate cancermap05215
Endometrial cancermap05213
Breast cancermap05224
Alzheimer's diseasemap05010
Non-alcoholic fatty liver disease (NAFLD)map04932
Insulin resistancemap04931
HTLV-I infectionmap05166
Measlesmap05162
Influenza Amap05164
Hepatitis Cmap05160
Epstein-Barr virus infectionmap05169
EGFR tyrosine kinase inhibitor resistancemap01521


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000192s00009308.1PF00069.20Pkinase933744.10E-62


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control68.601
SRR1783600control68.710
SRR1783602moderate drought stress61.501
SRR1811619moderate drought stress61.373

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain68.950
DRR006520Root Summer glycyrrhizin high producing strain68.216
DRR006521Root Winter glycyrrhizin high producing strain74.250
DRR006522Root Winter glycyrrhizin high producing strain71.953
DRR006523Root Summer glycyrrhizin low producing strain58.706
DRR006524Root Summer glycyrrhizin low producing strain58.432
DRR006525Leaf Summer glycyrrhizin high producing strain26.867
DRR006526Leaf Summer glycyrrhizin high producing strain26.638

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)58.427
SRR2868004Drought Stress(Tissue:root)57.416
SRR2967015Control (Tissue:root)60.571

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave22.934
SRR9715740Leave22.300
SRR9715741Leave27.063
SRR9715739Root29.058
SRR9715742Root43.163
SRR9715743Root41.743

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h67.562
SRR8749028MeJA induced 9h66.110
SRR8749029MeJA induced 9h47.934
SRR8749030Uninduced45.311
SRR8749031Uninduced37.791
SRR8749032Uninduced30.215

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root61.797
SRR8400027Control-Root62.327

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved