Gene detail information of Glyur000192s00009316.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G20270.10Leucine-rich receptor-like protein kinase family protein
NRXP_003592924.10Receptor-like protein kinase [Medicago truncatula]
COGYP_001192956.11.00E-53two component regulator [Flavobacterium johnsoniae UW101]
Swissprottr|O65440|BAME3_ARATH0Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 (Precursor)
trEMBLtr|G7IN89|G7IN89_MEDTR0LRR receptor-like kinase family protein {ECO:0000313|EMBL:AES63175.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold001925149857036+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.12.4


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005515  protein binding

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000192s00009316.1PF08263.7LRRNT_226640.00011
Glyur000192s00009316.1PF12799.2LRR_4921267.60E-07
Glyur000192s00009316.1PF00560.28LRR_11862080.75
Glyur000192s00009316.1PF00560.28LRR_12833050.68
Glyur000192s00009316.1PF00560.28LRR_13553740.021
Glyur000192s00009316.1PF00560.28LRR_14544750.86
Glyur000192s00009316.1PF00560.28LRR_14785000.99
Glyur000192s00009316.1PF00560.28LRR_15265470.075
Glyur000192s00009316.1PF00560.28LRR_15515700.81
Glyur000192s00009316.1PF07714.12Pkinase_Tyr6909572.00E-43


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control5.684
SRR1783600control5.641
SRR1783602moderate drought stress6.688
SRR1811619moderate drought stress6.486

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain5.680
DRR006520Root Summer glycyrrhizin high producing strain5.660
DRR006521Root Winter glycyrrhizin high producing strain0.278
DRR006522Root Winter glycyrrhizin high producing strain0.240
DRR006523Root Summer glycyrrhizin low producing strain5.324
DRR006524Root Summer glycyrrhizin low producing strain5.065
DRR006525Leaf Summer glycyrrhizin high producing strain4.839
DRR006526Leaf Summer glycyrrhizin high producing strain4.798

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)17.192
SRR2868004Drought Stress(Tissue:root)18.118
SRR2967015Control (Tissue:root)19.836

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave5.038
SRR9715740Leave1.780
SRR9715741Leave2.738
SRR9715739Root3.794
SRR9715742Root9.965
SRR9715743Root8.123

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.000
SRR8749028MeJA induced 9h0.000
SRR8749029MeJA induced 9h0.000
SRR8749030Uninduced0.110
SRR8749031Uninduced0.042
SRR8749032Uninduced0.031

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root6.339
SRR8400027Control-Root6.609

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved