Gene detail information of Glyur000192s00009336.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G09795.16.00E-174ATP phosphoribosyl transferase 2
NRXP_004485463.10PREDICTED: ATP phosphoribosyltransferase-like [Cicer arietinum]
COGYP_004175002.15.00E-88ATP phosphoribosyltransferase [Anaerolinea thermophila UNI-1]
Swissprottr|Q8GSJ1|HIS1B_ARATH0ATP phosphoribosyltransferase 2, chloroplastic (Precursor)
trEMBLtr|G7JFL4|G7JFL4_MEDTR0ATP phosphoribosyltransferase catalytic subunit {ECO:0000313|EMBL:AES92497.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00192124150128591-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00765hisG EC:2.4.2.17 Biosynthesis of amino acids map01230
Histidine metabolismmap00340


Gene Ontology

biological_process

GO:0000105  histidine biosynthetic process


cellular_component

GO:0005737  cytoplasm


molecular_function

GO:0000287  magnesium ion binding

GO:0003879  ATP phosphoribosyltransferase activity

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000192s00009336.1PF01634.13HisG972751.70E-47
Glyur000192s00009336.1PF08029.6HisG_C2783641.10E-18


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control58.291
SRR1783600control58.708
SRR1783602moderate drought stress59.047
SRR1811619moderate drought stress59.444

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain97.388
DRR006520Root Summer glycyrrhizin high producing strain97.197
DRR006521Root Winter glycyrrhizin high producing strain74.478
DRR006522Root Winter glycyrrhizin high producing strain72.809
DRR006523Root Summer glycyrrhizin low producing strain95.175
DRR006524Root Summer glycyrrhizin low producing strain96.065
DRR006525Leaf Summer glycyrrhizin high producing strain65.773
DRR006526Leaf Summer glycyrrhizin high producing strain65.196

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)73.251
SRR2868004Drought Stress(Tissue:root)50.948
SRR2967015Control (Tissue:root)62.056

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave59.860
SRR9715740Leave76.734
SRR9715741Leave61.649
SRR9715739Root51.558
SRR9715742Root59.704
SRR9715743Root60.127

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h63.854
SRR8749028MeJA induced 9h52.623
SRR8749029MeJA induced 9h48.101
SRR8749030Uninduced21.336
SRR8749031Uninduced8.696
SRR8749032Uninduced12.002

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root82.932
SRR8400027Control-Root86.798

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved