Gene detail

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Gene detail information of Glyur000192s00009344.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT5G23170.1	1.00E-67	Protein kinase superfamily protein
NR	XP_007148545.1	2.22E-132	hypothetical protein PHAVU_006G217700g [Phaseolus vulgaris]
COG	YP_004271969.1	4.00E-22	serine/threonine protein kinase [Planctomyces brasiliensis DSM 5305]
Swissprot	tr\|Q50IG5\|STPKL_ARATH	9.00E-81	Serine/threonine-protein kinase-like protein At5g23170
trEMBL	tr\|V7BRD7\|V7BRD7_PHAVU	8.00E-133	Uncharacterized protein {ECO:0000313\|EMBL:ESW20539.1}

Sequence

Transcript Sequence

>Glyur000192s00009344.1
ATGGCAGAGTTTGATTATGAAGAGGTAGCAAAAGCAACAGATAACTTCAACCCGACAAGGCTCATAGGCAAAGGAAGCCATGGATGGGTCTATAAAGGTGCACTCCTCAAAGATGATAAGTACAGGTTGGTTGCCGTAAAGAAGCCACCACCTCAACCTCAATGCCTTCACGACATCAACTCCAAGCTGGAAAACGAAATCCGAGTGCTCTCCTCTCTAAGGGAAAGCCCACACGTGCTCAAACTCTTAGGTACAAGTAGTTATGACTCGTTGGAGAACAAGAACAAACACAAGGTGATCGTGATGGAGCTTATGCCCAATGGCTCCCTCTATGACTGGCTCCACTCTGCTACAGCACCACCCACGTGGCCTAAACGCGTGGAAATCGCCATGCAGGTCGCACGTGCGGTGCAGTTTCTTCACGAAGGGAAGCCTTTGGTGATCCACAGAGACATCAAGTCCACCAACATCTTGTTCGATTCACAATGGAATCCCAAGTTGGCAGATTTTGGACTCTCTGTTATGGCAGATCACGAGGCACTCGCACCGAGCCAACCCGCTGGGACTATAGGGTACTTGGACCCGAGTTACACCACACCCAGTAAACTCAGCACCAAAAACGACATGTTCAGCTTTGGGGTTGTGTTGTTGGAGATCATGAGTGGCAGAAAGGCCATCGATGTGTGCAATTCACCGGCTTCGTTAGTGGAATGGGCCATTCCGTTAATCCAGCAACGGCTTCTGGATGAAATCTGTGACACGAGAATGGCACTTCCTGCAGCATCCACTTTGGTGGGCCCCATCACTATGTTTTTAGAGGTTGCCGCGCGTTGTGTGTCACCAAACGAAGGTGATCGTCCATCGGCAGGGGAAGTGGTTTCTTCCCATTTGGAAAAGCCTTTTGGTGCGGTACTTGAGAAAGAACAGGAGGAGGAAGCTGAAGATCACCACGCCCAGGGCATGCACTACGAGCAAGCAAGCATGAGCATTGATGCGCATTGCCAAGCCAAAGGTGGTGTGGTGGGTAGGCAGAGAATATGTAAGCTTTAG

Protein Sequence

Location information(JBrowse)

Scaffold	Start	End	Strand
Scaffold00192	178243	179710	+

Gene family

Gene family	subfamily
Protein Kinases Family	PPC:1.14.1

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006468 protein phosphorylation

molecular_function GO:0004672 protein kinase activity GO:0005524 ATP binding GO:0016772 transferase activity, transferring phosphorus-containing groups

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000192s00009344.1	PF00069.20	Pkinase	19	295	7.70E-40

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	2.642
SRR1783600	control	2.650
SRR1783602	moderate drought stress	1.036
SRR1811619	moderate drought stress	1.156

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	1.651
DRR006520	Root Summer glycyrrhizin high producing strain	1.783
DRR006521	Root Winter glycyrrhizin high producing strain	0.000
DRR006522	Root Winter glycyrrhizin high producing strain	0.000
DRR006523	Root Summer glycyrrhizin low producing strain	1.571
DRR006524	Root Summer glycyrrhizin low producing strain	1.802
DRR006525	Leaf Summer glycyrrhizin high producing strain	0.708
DRR006526	Leaf Summer glycyrrhizin high producing strain	0.719

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress(Tissue:root)	5.484
SRR2868004	Drought Stress(Tissue:root)	3.101
SRR2967015	Control (Tissue:root)	3.316

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leave	1.293
SRR9715740	Leave	0.166
SRR9715741	Leave	0.322
SRR9715739	Root	0.306
SRR9715742	Root	3.061
SRR9715743	Root	2.187

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.188
SRR8749028	MeJA induced 9h	0.114
SRR8749029	MeJA induced 9h	0.071
SRR8749030	Uninduced	0.002
SRR8749031	Uninduced	0.000
SRR8749032	Uninduced	0.030

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment-Root	1.554
SRR8400027	Control-Root	1.104