Gene detail information of Glyur000192s00009350.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G11450.10DnaJ domain ;Myb-like DNA-binding domain
NRXP_003531595.10PREDICTED: dnaJ homolog subfamily C member 2-like [Glycine max]
COGYP_006766380.13.00E-09DnaJ-class molecular chaperone with C-terminal Zn finger domain [Leptospirillum ferriphilum ML-04]
Swissprottr|Q6XL73|DNJ39_ARATH1.00E-06Chaperone protein dnaJ 39
trEMBLtr|I1KUP6|I1KUP6_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA08G20150.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00192203915205846+


Gene family

Gene familysubfamily
Transcription Factors FamilyMYB


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

molecular_function

GO:0003677  DNA binding

GO:0003682  chromatin binding



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000192s00009350.1PF00226.26DnaJ951741.30E-16
Glyur000192s00009350.1PF00249.26Myb_DNA-binding4595001.80E-05
Glyur000192s00009350.1PF00249.26Myb_DNA-binding5866292.40E-06


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control32.281
SRR1783600control31.672
SRR1783602moderate drought stress24.234
SRR1811619moderate drought stress27.619

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain41.306
DRR006520Root Summer glycyrrhizin high producing strain40.853
DRR006521Root Winter glycyrrhizin high producing strain49.237
DRR006522Root Winter glycyrrhizin high producing strain48.425
DRR006523Root Summer glycyrrhizin low producing strain45.844
DRR006524Root Summer glycyrrhizin low producing strain44.865
DRR006525Leaf Summer glycyrrhizin high producing strain17.628
DRR006526Leaf Summer glycyrrhizin high producing strain17.148

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)34.659
SRR2868004Drought Stress(Tissue:root)33.016
SRR2967015Control (Tissue:root)34.314

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave21.312
SRR9715740Leave27.168
SRR9715741Leave24.416
SRR9715739Root4.956
SRR9715742Root30.555
SRR9715743Root26.154

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h69.697
SRR8749028MeJA induced 9h54.597
SRR8749029MeJA induced 9h48.705
SRR8749030Uninduced61.634
SRR8749031Uninduced81.656
SRR8749032Uninduced49.857

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root34.217
SRR8400027Control-Root30.547

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved