Gene detail information of Glyur000192s00009358.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G60940.23.00E-170SNF1-related protein kinase 2.10
NRXP_003531593.10PREDICTED: serine/threonine-protein kinase SRK2A-like isoform X1 [Glycine max]
COGYP_004862245.13.00E-24protein kinase domain-containing protein [Candidatus Chloracidobacterium thermophilum B]
Swissprottr|Q9C958|SRK2B_ARATH0Serine/threonine-protein kinase SRK2B
trEMBLtr|I1KUN7|I1KUN7_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA08G20090.4}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00192233305236765+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:4.2.4


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K14498SNRK2 EC:2.7.11.1 MAPK signaling pathway - plant map04016
Plant hormone signal transductionmap04075


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000192s00009358.1PF00069.20Pkinase42606.20E-71


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control81.929
SRR1783600control83.767
SRR1783602moderate drought stress127.975
SRR1811619moderate drought stress124.573

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain77.408
DRR006520Root Summer glycyrrhizin high producing strain75.321
DRR006521Root Winter glycyrrhizin high producing strain50.901
DRR006522Root Winter glycyrrhizin high producing strain47.719
DRR006523Root Summer glycyrrhizin low producing strain113.037
DRR006524Root Summer glycyrrhizin low producing strain113.120
DRR006525Leaf Summer glycyrrhizin high producing strain18.424
DRR006526Leaf Summer glycyrrhizin high producing strain19.559

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)55.089
SRR2868004Drought Stress(Tissue:root)59.553
SRR2967015Control (Tissue:root)60.681

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave25.160
SRR9715740Leave22.160
SRR9715741Leave32.216
SRR9715739Root9.989
SRR9715742Root39.174
SRR9715743Root33.487

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h91.432
SRR8749028MeJA induced 9h132.457
SRR8749029MeJA induced 9h140.631
SRR8749030Uninduced141.270
SRR8749031Uninduced147.896
SRR8749032Uninduced123.300

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root54.561
SRR8400027Control-Root62.985

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved