Gene detail information of Glyur000193s00013955.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G33790.1 | 0 | Jojoba acyl CoA reductase-related male sterility protein |
| NR | XP_004487512.1 | 0 | PREDICTED: fatty acyl-CoA reductase 3-like [Cicer arietinum] |
| COG | YP_644868.1 | 6.00E-79 | HAD family hydrolase [Rubrobacter xylanophilus DSM 9941] |
| Swissprot | tr|Q93ZB9|FACR3_ARATH | 0 | Fatty acyl-CoA reductase 3 |
| trEMBL | tr|K7LVP6|K7LVP6_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA12G30850.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00193 | 424 | 4134 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| K13356 | FAR | EC:1.2.1.84 | Cutin, suberine and wax biosynthesis | map00073 |
| Peroxisome | map04146 | |||
| Longevity regulating pathway - worm | map04212 |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000193s00013955.1 | PF07993.7 | NAD_binding_4 | 17 | 318 | 4.70E-79 |
| Glyur000193s00013955.1 | PF03015.14 | Sterile | 391 | 490 | 3.40E-13 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 25.408 |
| SRR1783600 | control | 25.672 |
| SRR1783602 | moderate drought stress | 14.380 |
| SRR1811619 | moderate drought stress | 14.493 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.146 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.145 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.146 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.147 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 95.510 |
| SRR2868004 | Drought Stress(Tissue:root) | 118.623 |
| SRR2967015 | Control (Tissue:root) | 98.577 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.090 |
| SRR9715740 | Leave | 0.128 |
| SRR9715741 | Leave | 0.631 |
| SRR9715739 | Root | 13.490 |
| SRR9715742 | Root | 29.465 |
| SRR9715743 | Root | 25.975 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 9.596 |
| SRR8749028 | MeJA induced 9h | 5.973 |
| SRR8749029 | MeJA induced 9h | 12.293 |
| SRR8749030 | Uninduced | 20.112 |
| SRR8749031 | Uninduced | 16.472 |
| SRR8749032 | Uninduced | 31.245 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 225.395 |
| SRR8400027 | Control-Root | 148.780 |