Gene detail information of Glyur000193s00013964.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G44600.10cyclophilin71
NRXP_003543440.10PREDICTED: peptidylprolyl isomerase domain and WD repeat-containing protein 1-like [Glycine max]
COGYP_003503769.19.00E-59peptidyl-prolyl isomerase [Denitrovibrio acetiphilus DSM 12809]
Swissprottr|Q8W4D0|CPY71_ARATH0Peptidyl-prolyl cis-trans isomerase CYP71
trEMBLtr|I1M4E9|I1M4E9_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA13G39500.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold001934746253139-


Gene family

Gene familysubfamily
Ubiquitin FamilyDWD


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

biological_process

GO:0000413  protein peptidyl-prolyl isomerization

GO:0006457  protein folding


molecular_function

GO:0003755  peptidyl-prolyl cis-trans isomerase activity

GO:0005515  protein binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000193s00013964.1PF00400.27WD4051810.00067
Glyur000193s00013964.1PF00400.27WD40921250.0037
Glyur000193s00013964.1PF00160.16Pro_isomerase4636118.80E-53


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control12.797
SRR1783600control12.753
SRR1783602moderate drought stress15.379
SRR1811619moderate drought stress15.365

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain17.199
DRR006520Root Summer glycyrrhizin high producing strain17.197
DRR006521Root Winter glycyrrhizin high producing strain17.668
DRR006522Root Winter glycyrrhizin high producing strain17.130
DRR006523Root Summer glycyrrhizin low producing strain14.866
DRR006524Root Summer glycyrrhizin low producing strain14.841
DRR006525Leaf Summer glycyrrhizin high producing strain8.495
DRR006526Leaf Summer glycyrrhizin high producing strain8.284

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)22.267
SRR2868004Drought Stress(Tissue:root)22.924
SRR2967015Control (Tissue:root)19.742

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave8.574
SRR9715740Leave11.860
SRR9715741Leave9.452
SRR9715739Root5.033
SRR9715742Root10.246
SRR9715743Root9.899

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h19.211
SRR8749028MeJA induced 9h15.914
SRR8749029MeJA induced 9h13.086
SRR8749030Uninduced7.423
SRR8749031Uninduced3.425
SRR8749032Uninduced4.567

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root20.094
SRR8400027Control-Root19.766

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved