Gene detail information of Glyur000193s00013987.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G22740.10cellulose synthase-like A02
NRXP_003551076.10PREDICTED: glucomannan 4-beta-mannosyltransferase 2-like [Glycine max]
COGYP_004055443.11.00E-70family 2 glycosyl transferase [Marivirga tractuosa DSM 4126]
Swissprottr|Q9FNI7|CSLA2_ARATH0Glucomannan 4-beta-mannosyltransferase 2
trEMBLtr|I1MS67|I1MS67_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA17G05350.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00193216347222379-


Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyGT2


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

Not hits found.


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000193s00013987.1PF13641.1Glyco_tranf_2_3983338.10E-33


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control34.623
SRR1783600control34.366
SRR1783602moderate drought stress18.509
SRR1811619moderate drought stress18.632

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain16.613
DRR006520Root Summer glycyrrhizin high producing strain16.523
DRR006521Root Winter glycyrrhizin high producing strain1.316
DRR006522Root Winter glycyrrhizin high producing strain1.262
DRR006523Root Summer glycyrrhizin low producing strain2.959
DRR006524Root Summer glycyrrhizin low producing strain3.022
DRR006525Leaf Summer glycyrrhizin high producing strain8.961
DRR006526Leaf Summer glycyrrhizin high producing strain8.796

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)34.162
SRR2868004Drought Stress(Tissue:root)29.898
SRR2967015Control (Tissue:root)41.630

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave6.463
SRR9715740Leave1.638
SRR9715741Leave2.414
SRR9715739Root6.975
SRR9715742Root31.179
SRR9715743Root27.421

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.951
SRR8749028MeJA induced 9h0.561
SRR8749029MeJA induced 9h1.023
SRR8749030Uninduced0.514
SRR8749031Uninduced0.179
SRR8749032Uninduced0.163

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root79.266
SRR8400027Control-Root80.525

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved