Gene detail information of Glyur000194s00016333.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G24110.1 | 5.00E-38 | WRKY DNA-binding protein 30 |
| NR | KHN06293.1 | 1.96E-142 | Putative WRKY transcription factor 41 [Glycine soja] |
| Swissprot | tr|Q9FL62|WRK30_ARATH | 5.00E-46 | Probable WRKY transcription factor 30 |
| trEMBL | tr|I1NCK2|I1NCK2_SOYBN | 3.00E-142 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA19G44380.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00194 | 97685 | 101286 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | WRKY |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000194s00016333.1 | PF03106.10 | WRKY | 118 | 179 | 6.40E-26 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.480 |
| SRR1783600 | control | 2.533 |
| SRR1783602 | moderate drought stress | 1.175 |
| SRR1811619 | moderate drought stress | 1.134 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 69.082 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 69.067 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.056 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.053 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 91.239 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 91.868 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 100.801 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 100.067 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 10.251 |
| SRR2868004 | Drought Stress(Tissue:root) | 23.918 |
| SRR2967015 | Control (Tissue:root) | 15.140 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 206.533 |
| SRR9715740 | Leave | 269.095 |
| SRR9715741 | Leave | 191.463 |
| SRR9715739 | Root | 14.638 |
| SRR9715742 | Root | 51.379 |
| SRR9715743 | Root | 42.556 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 21.088 |
| SRR8749028 | MeJA induced 9h | 20.360 |
| SRR8749029 | MeJA induced 9h | 36.704 |
| SRR8749030 | Uninduced | 118.259 |
| SRR8749031 | Uninduced | 59.190 |
| SRR8749032 | Uninduced | 41.435 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 9.983 |
| SRR8400027 | Control-Root | 79.853 |