Gene detail

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Gene detail information of Glyur000194s00016349.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT2G46340.1	0	SPA (suppressor of phyA-105) protein family
NR	XP_003529899.1	0	PREDICTED: protein SUPPRESSOR OF PHYA-105 1-like isoform X1 [Glycine max]
COG	YP_001865660.1	2.00E-13	hypothetical protein Npun_R2098 [Nostoc punctiforme PCC 73102]
Swissprot	tr\|Q9SYX2\|SPA1_ARATH	0	Protein SUPPRESSOR OF PHYA-105 1
trEMBL	tr\|I1KHX9\|I1KHX9_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA07G06420.1}

Sequence

Transcript Sequence

>Glyur000194s00016349.1
TGAATTCAAGTATTTATTTGGTTTCATGACACATTGCTTGTCACTGTTGTGGACTAGATATTTTCCCTTCCCCTCCAAGGAACTCTGGTTTGCTTTAGCTCGTAAGGTTTCAAAGGAAAGGGGTGTTGGATGTTGTCCAAACCATGTCATTTGAAAGGAACCGCATTTGGATTGCATGAATTGACTACCGNGAGACATGACTGCAAATGGTGGGACAGGAACTGAGGAGCAGAAGAGGAAAAAAAACCAATGACCCTTTTCTCAAGCCAGGGAGACACCAAAATATGCCAAGGTCACTTAGATTGTGCACATCTATTAGGAAGGATTGGCCAGAGGGTTTGCCAAGTGACAATGTGATTGGTAATGAGGGTAACGGTTTGAGTAGATATAGTAATTTCTTAGCTGGATCTGGACCCCCTAGTACTAGTTTTTGTTCCACCACAGATTCTAAACACATTGAAGAGTTTCCTGTTAGGAATTATAAGAACCTGAATGTGGCTTTAGTTAGCCCCCCAACACATAGTTCCAAACAGCCCCAGAGGAATCAANTAGCTATTGAATCTAAGTATACTAGCTTGAGAAGGGAAATTGCACCAAAGGTTGAAGAACAGATACCACTCAGATTAAGCAAAGGACTGAAGGGAATTGAATCTGAATTTTGGGGCCTGAAGTCTCCTTCTAGAACGGATGTAAATCGTGGAGCACAAAAAGTCTTTGCTAATATAAGCAATGTAGACAAGACTATCACATCCTCAAGCAATGCACATCTTATTAGAAGTATTACACCAAGTACTTCATCTACAAATAATTATCCTCAATTGATAGTAGAGAAAACAGTGAAGGGAAAAGGAGTTATTTGCAAAGATTTAGACAAAAGCTTCAGTCTTGGAGGAACACTTATGAGGCAGGAGGATGAGAAACCTGGTACACTGCTGAGGTCAAATGTTAATGATAATATGCATTCCTTGCAAGGAATTGTCACGTCTGGAACCGGATCTTTCTGCGATGGACTCAACTTAAGAGAGTGGATGAAGTCTGAAGGCCATAAAATGAAGAAATCAGAAAGGCTATGCATATTTAAACAGATCTTGGAATCGGTTGATCTTGCACACTCCCAAGGAGTTGTCTTGCATGACCTAAGACCATCTTGTTTCACCTTATTGCCTTCAAATAAAATCAAATACATTGGTTCATATGGCCAGCAAGTGTTAGACAATAAAGTCATGAACTGCAATGTGACTAGGAAAAGGCCATGGGAACAGGATATCTGTGCTTCCCAAGGTTTGAGTACAAAGCAGCAAAAGCTCTGTGAGGAGACAACATCTCTTAGGCAGCAGCAGCAGCATCACTTCACCTGTATTCATGGCTGTAGGACTACAACAGTGAATCAAACTGACTCTGGGACAAAGAGGCCCATGGAATCAAGGAGTGAGGAAAGCCCGTGCCAAGATGGTTGCAGTTGTCAACATGCTTCTGTAACCATTCAGTTAGAAGAGAAGTGGTATTGTAGTCCAGAAATGCTCAATGATGGAGTTTGTACATTTTCGTCAAATATTTATAGCCTTGGAGTTCTTCTTTTTGAGTTGTTGTGCAATATTGAGTCATTGGAAGCGCATTCAATTGTGATGTTGGATTTGTCTCATAGAATCTTACCGCCAAAATTTCTATCAGAAAATGCAAAGGAAGCTGGTTTTTGTCTTTGGCTTCTTCACCCTGAACCTTCTTCTCGCCCCAATACCAGGATGATTATAGAATCTGAATTTATACGTGAATTAGAGGAATCAAATTCTGGAGATGGTGTTATAGTATTGGAAGATGATGTGGTTGAAACAGAGCATTTGCTACATTTTCTAATTTCACTTGAAGAAGAAAAAAAGAAACAGGAAGCCAAATTGGCAGAAGAGCTAAATTGCCTGGATGAAGATATTAAGGAGGTGGAAAGAAATTATTCACATGGGACTGGTTCGTTATTTCCTTCGGCACAAATGAACTACCCTGAAGTGAGAGAAAACAGTTACCATTTTCAAAATTCTTCCAGTTCAGATATTAGTAGGTCTATTCCAAGCTCATTTGTTAATGAAGCAAGATTTATGAGTAATATAAATCAGCTAGAGAATTCTTACTTTTCCATGAGGTCCCAAGTATTGCTCAAAGAGGCTTCAGCTGTCGAAAGCAATGATAAAAGTGTGATGAAAAGTAGATGGAGACTGCCTCATTTAGAGAATGTTAGCAATGAGCCAAGAAGAAAAATTCAGAGTTCTGTTGGTTGCCTAGGATCCTTCTTTGAAGGTTTATGCAAGTTTGCTCGTTACACCAAGTTTGAAGAGCGCGGAACGTTAAGAAATAAAGATCTGCTTAGTTCTGCCAACGTAATATGTGCTTTAAGTTTTGACAGAGATGAGGACTACATTGCAGCAGGTGGAGTTTCAAAGAAAATAAAGATTTTTGACCTCAATGCTATTTCAAGTGATTCTATAGACATCCAGTACCCCGTTGTTGAAATGTCAAACANATCATTGCTTAGTTGTGTGTGCTGGAACAGCTATATAAAAAATCATCTGGCATCTACTGATTATGATGGTGTGGTTCAGATGTGGGATGCAAGCACTGGTCAGCCATTGTCTCANTACACGGAGCACCAAAAGAGGGCTTGGTCTGTTCACTTCTCTGTGTCAGACCCAAAAATGTTTGCTAGTGGAAGTGATGACTGCTCTAGAAATTCTCTAGGAACCATCTCAAGCCCAGCAAATGTTTGTTGTGTTCAGTTCTCTGCATACTCGCCACATCTTTTATTTTTTGGATCAGCTGATTACAAGGTGTATGGTTATGATCTTCGTCACACTAGAATCCCTTTGTGCACATTGGCTGGTCATGGGAAAGCTGTTAGCTATGTAAAGCTTCTAGATGCAGAAACAGTTGTCTCGGCTTCCACTGACAGCTCTTTGAAGCTTTGGGACCTGAAGAAAACTAGCTCTACTGGGTTGTCATCTGATGCTTGTGACATAACCTTTAGAGGTCATAGTAATGAGAAGAATTTCGTGGGTTTATCTGTTTTGGATGAATTCATTGCATGTGGTTCAGAATCTAATGAGGTATACTGTTATCACAAATCTCTGCCGGTGCCAGTCATTTCTCACAAATTCGAGTCGATCGATCCCATTTCTGGTCATTCAAACAGTGGTGATAGTGGACAGTTTGTTTCCAGTGTCTGCTGGAGAAAGAAGTCTAACATGCTTGTTGCTGCCAACTCGGTAGGAATTGTGAAACTACTGCAGATGAACTTTGTTATCCCTTACCTGAAAAAGAATATATTTGTTGAAGATTGGCAAAAGAATGTGGTTTTAGGAAGAGCTGCTGATACCTTTTCTACTTTTTAG

Protein Sequence

>Glyur000194s00016349.1
MVGQELRSRRGKKTNDPFLKPGRHQNMPRSLRLCTSIRKDWPEGLPSDNVIGNEGNGLSRYSNFLAGSGPPSTSFCSTTDSKHIEEFPVRNYKNLNVALVSPPTHSSKQPQRNQXAIESKYTSLRREIAPKVEEQIPLRLSKGLKGIESEFWGLKSPSRTDVNRGAQKVFANISNVDKTITSSSNAHLIRSITPSTSSTNNYPQLIVEKTVKGKGVICKDLDKSFSLGGTLMRQEDEKPGTLLRSNVNDNMHSLQGIVTSGTGSFCDGLNLREWMKSEGHKMKKSERLCIFKQILESVDLAHSQGVVLHDLRPSCFTLLPSNKIKYIGSYGQQVLDNKVMNCNVTRKRPWEQDICASQGLSTKQQKLCEETTSLRQQQQHHFTCIHGCRTTTVNQTDSGTKRPMESRSEESPCQDGCSCQHASVTIQLEEKWYCSPEMLNDGVCTFSSNIYSLGVLLFELLCNIESLEAHSIVMLDLSHRILPPKFLSENAKEAGFCLWLLHPEPSSRPNTRMIIESEFIRELEESNSGDGVIVLEDDVVETEHLLHFLISLEEEKKKQEAKLAEELNCLDEDIKEVERNYSHGTGSLFPSAQMNYPEVRENSYHFQNSSSSDISRSIPSSFVNEARFMSNINQLENSYFSMRSQVLLKEASAVESNDKSVMKSRWRLPHLENVSNEPRRKIQSSVGCLGSFFEGLCKFARYTKFEERGTLRNKDLLSSANVICALSFDRDEDYIAAGGVSKKIKIFDLNAISSDSIDIQYPVVEMSNXSLLSCVCWNSYIKNHLASTDYDGVVQMWDASTGQPLSXYTEHQKRAWSVHFSVSDPKMFASGSDDCSRNSLGTISSPANVCCVQFSAYSPHLLFFGSADYKVYGYDLRHTRIPLCTLAGHGKAVSYVKLLDAETVVSASTDSSLKLWDLKKTSSTGLSSDACDITFRGHSNEKNFVGLSVLDEFIACGSESNEVYCYHKSLPVPVISHKFESIDPISGHSNSGDSGQFVSSVCWRKKSNMLVAANSVGIVKLLQMNFVIPYLKKNIFVEDWQKNVVLGRAADTFSTF

Location information(JBrowse)

Scaffold	Start	End	Strand
Scaffold00194	197297	203846	+

Gene family

Gene family	subfamily
Protein Kinases Family	PPC:1.1.1
Ubiquitin Family	DWD

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006468 protein phosphorylation

molecular_function GO:0004672 protein kinase activity GO:0005515 protein binding GO:0005524 ATP binding GO:0016772 transferase activity, transferring phosphorus-containing groups

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000194s00016349.1	PF00069.20	Pkinase	423	520	3.20E-06
Glyur000194s00016349.1	PF00400.27	WD40	802	836	0.01
Glyur000194s00016349.1	PF00400.27	WD40	882	917	0.0017

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.000
SRR1783600	control	0.000
SRR1783602	moderate drought stress	0.001
SRR1811619	moderate drought stress	0.007

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.225
DRR006520	Root Summer glycyrrhizin high producing strain	0.215
DRR006521	Root Winter glycyrrhizin high producing strain	3.034
DRR006522	Root Winter glycyrrhizin high producing strain	2.695
DRR006523	Root Summer glycyrrhizin low producing strain	0.310
DRR006524	Root Summer glycyrrhizin low producing strain	0.354
DRR006525	Leaf Summer glycyrrhizin high producing strain	31.871
DRR006526	Leaf Summer glycyrrhizin high producing strain	31.001

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress(Tissue:root)	1.184
SRR2868004	Drought Stress(Tissue:root)	0.439
SRR2967015	Control (Tissue:root)	0.859

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leave	44.429
SRR9715740	Leave	63.591
SRR9715741	Leave	40.505
SRR9715739	Root	0.000
SRR9715742	Root	0.086
SRR9715743	Root	0.000

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.374
SRR8749028	MeJA induced 9h	0.571
SRR8749029	MeJA induced 9h	0.284
SRR8749030	Uninduced	0.327
SRR8749031	Uninduced	0.165
SRR8749032	Uninduced	0.148

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment-Root	0.564
SRR8400027	Control-Root	0.504