Gene detail information of Glyur000194s00016350.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G64300.2 | 0 | Protein kinase family protein |
| NR | XP_004516399.1 | 0 | PREDICTED: mitogen-activated protein kinase kinase kinase 7-like isoform X1 [Cicer arietinum] |
| COG | NP_471268.1 | 3.00E-17 | hypothetical protein lin1934 [Listeria innocua Clip11262] |
| Swissprot | tr|P25848|PHY1_CERPU | 4.00E-40 | Protein kinase |
| trEMBL | tr|A0A072TMR2|A0A072TMR2_MEDTR | 0 | Serine/Threonine kinase family protein {ECO:0000313|EMBL:KEH18707.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00194 | 204362 | 207910 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Protein Kinases Family | PPC:2.1.1 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000194s00016350.1 | PF06760.6 | DUF1221 | 21 | 236 | 4.10E-102 |
| Glyur000194s00016350.1 | PF07714.12 | Pkinase_Tyr | 269 | 503 | 1.20E-40 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.000 |
| SRR1783600 | control | 0.000 |
| SRR1783602 | moderate drought stress | 0.000 |
| SRR1811619 | moderate drought stress | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.515 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.581 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 0.000 |
| SRR2868004 | Drought Stress(Tissue:root) | 0.000 |
| SRR2967015 | Control (Tissue:root) | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.005 |
| SRR9715740 | Leave | 0.000 |
| SRR9715741 | Leave | 0.000 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.213 |
| SRR8749028 | MeJA induced 9h | 0.238 |
| SRR8749029 | MeJA induced 9h | 0.089 |
| SRR8749030 | Uninduced | 0.250 |
| SRR8749031 | Uninduced | 0.258 |
| SRR8749032 | Uninduced | 0.281 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.000 |
| SRR8400027 | Control-Root | 0.000 |