Gene detail information of Glyur000194s00016358.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G56760.15.00E-126serine acetyltransferase 1;1
NRXP_004510733.10PREDICTED: serine acetyltransferase 5-like [Cicer arietinum]
COGYP_001980889.19.00E-95serine acetyltransferase [Cellvibrio japonicus Ueda107]
Swissprottr|Q42538|SAT5_ARATH1.00E-171Serine acetyltransferase 5
trEMBLtr|A0A072TYU4|A0A072TYU4_MEDTR0Serine acetyltransferase {ECO:0000313|EMBL:KEH18715.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00194254418256298+


Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00640cysE EC:2.3.1.30 Carbon metabolism map01200
Biosynthesis of amino acidsmap01230
Sulfur metabolismmap00920
Cysteine and methionine metabolismmap00270
Biofilm formation - Vibrio choleraemap05111


Gene Ontology

biological_process

GO:0006535  cysteine biosynthetic process from serine


cellular_component

GO:0005737  cytoplasm


molecular_function

GO:0009001  serine O-acetyltransferase activity

GO:0016740  transferase activity

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000194s00016358.1PF06426.9SATase_N771812.80E-38
Glyur000194s00016358.1PF00132.19Hexapep2612941.30E-11


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control19.713
SRR1783600control19.800
SRR1783602moderate drought stress27.794
SRR1811619moderate drought stress28.071

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain20.046
DRR006520Root Summer glycyrrhizin high producing strain19.837
DRR006521Root Winter glycyrrhizin high producing strain18.237
DRR006522Root Winter glycyrrhizin high producing strain18.041
DRR006523Root Summer glycyrrhizin low producing strain17.807
DRR006524Root Summer glycyrrhizin low producing strain18.357
DRR006525Leaf Summer glycyrrhizin high producing strain46.167
DRR006526Leaf Summer glycyrrhizin high producing strain45.656

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)49.410
SRR2868004Drought Stress(Tissue:root)49.604
SRR2967015Control (Tissue:root)48.535

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave76.044
SRR9715740Leave83.048
SRR9715741Leave64.688
SRR9715739Root106.951
SRR9715742Root41.394
SRR9715743Root51.766

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h25.342
SRR8749028MeJA induced 9h36.343
SRR8749029MeJA induced 9h16.454
SRR8749030Uninduced10.172
SRR8749031Uninduced4.519
SRR8749032Uninduced10.144

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root48.593
SRR8400027Control-Root41.057

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved