Gene detail information of Glyur000195s00012833.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G22910.10FIZZY-related 2
NRBAO79527.10hypothetical protein [Lotus japonicus]
COGYP_007158004.11.00E-27(Myosin heavy-chain) kinase [Anabaena cylindrica PCC 7122]
Swissprottr|Q8L3Z8|FZR2_ARATH0Protein FIZZY-RELATED 2
trEMBLtr|A0A024FSI1|A0A024FSI1_LOTJA0Uncharacterized protein {ECO:0000313|EMBL:BAO79527.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold001951643721260+


Gene family

Gene familysubfamily
Ubiquitin FamilyDWD


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

molecular_function

GO:0005515  protein binding



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000195s00012833.1PF00400.27WD402152460.0032
Glyur000195s00012833.1PF00400.27WD402582934.10E-07
Glyur000195s00012833.1PF00400.27WD402993383.90E-06
Glyur000195s00012833.1PF00400.27WD403874234.50E-08


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control3.645
SRR1783600control3.751
SRR1783602moderate drought stress2.751
SRR1811619moderate drought stress2.675

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain2.065
DRR006520Root Summer glycyrrhizin high producing strain2.138
DRR006521Root Winter glycyrrhizin high producing strain5.603
DRR006522Root Winter glycyrrhizin high producing strain5.575
DRR006523Root Summer glycyrrhizin low producing strain2.308
DRR006524Root Summer glycyrrhizin low producing strain2.256
DRR006525Leaf Summer glycyrrhizin high producing strain2.435
DRR006526Leaf Summer glycyrrhizin high producing strain2.722

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)10.262
SRR2868004Drought Stress(Tissue:root)8.990
SRR2967015Control (Tissue:root)10.258

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave3.418
SRR9715740Leave2.802
SRR9715741Leave1.528
SRR9715739Root2.149
SRR9715742Root1.486
SRR9715743Root1.548

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h7.763
SRR8749028MeJA induced 9h6.368
SRR8749029MeJA induced 9h4.310
SRR8749030Uninduced1.611
SRR8749031Uninduced2.293
SRR8749032Uninduced1.862

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root6.661
SRR8400027Control-Root7.279

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved