Gene detail information of Glyur000195s00012857.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G12740.1 | 0 | cytochrome P450, family 87, subfamily A, polypeptide 2 |
| NR | XP_007158463.1 | 0 | hypothetical protein PHAVU_002G154400g [Phaseolus vulgaris] |
| COG | YP_007055574.1 | 4.00E-43 | cytochrome P450 [Rivularia sp. PCC 7116] |
| Swissprot | tr|Q7XU38|C87A3_ORYSJ | 0 | Cytochrome P450 87A3 |
| trEMBL | tr|V7CJU0|V7CJU0_PHAVU | 0 | Uncharacterized protein {ECO:0000313|EMBL:ESW30457.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00195 | 178638 | 181421 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Cytochrome P450 Family | CYP87A2 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000195s00012857.1 | PF00067.17 | p450 | 3 | 171 | 3.70E-08 |
| Glyur000195s00012857.1 | PF00067.17 | p450 | 192 | 375 | 3.20E-41 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.000 |
| SRR1783600 | control | 0.000 |
| SRR1783602 | moderate drought stress | 0.000 |
| SRR1811619 | moderate drought stress | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 5.921 |
| SRR2868004 | Drought Stress(Tissue:root) | 5.137 |
| SRR2967015 | Control (Tissue:root) | 3.674 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.028 |
| SRR9715740 | Leave | 0.000 |
| SRR9715741 | Leave | 0.037 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.014 |
| SRR9715743 | Root | 0.037 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 54.568 |
| SRR8749028 | MeJA induced 9h | 5.497 |
| SRR8749029 | MeJA induced 9h | 5.031 |
| SRR8749030 | Uninduced | 0.413 |
| SRR8749031 | Uninduced | 0.510 |
| SRR8749032 | Uninduced | 0.697 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.271 |
| SRR8400027 | Control-Root | 0.483 |