Gene detail information of Glyur000195s00012859.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G23050.25.00E-122PAS domain-containing protein tyrosine kinase family protein
NRXP_006573761.10PREDICTED: RGS domain-containing serine/threonine-protein kinase A isoform X1 [Glycine max]
COGYP_001958461.11.00E-40hypothetical protein Aasi_1443 [Candidatus Amoebophilus asiaticus 5a2]
Swissprottr|Q9FPR3|EDR1_ARATH2.00E-105Serine/threonine-protein kinase EDR1
trEMBLtr|K7K556|K7K556_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA01G42610.2}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00195200333207646+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:2.1.3


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation

GO:0007165  signal transduction


molecular_function

GO:0004672  protein kinase activity

GO:0004871  signal transducer activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000195s00012859.1PF13426.1PAS_91252156.70E-12
Glyur000195s00012859.1PF07714.12Pkinase_Tyr5197709.10E-68


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.827
SRR1783600control0.822
SRR1783602moderate drought stress0.860
SRR1811619moderate drought stress0.853

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain1.292
DRR006520Root Summer glycyrrhizin high producing strain1.293
DRR006521Root Winter glycyrrhizin high producing strain4.127
DRR006522Root Winter glycyrrhizin high producing strain3.969
DRR006523Root Summer glycyrrhizin low producing strain5.187
DRR006524Root Summer glycyrrhizin low producing strain5.255
DRR006525Leaf Summer glycyrrhizin high producing strain1.052
DRR006526Leaf Summer glycyrrhizin high producing strain0.987

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)16.665
SRR2868004Drought Stress(Tissue:root)23.624
SRR2967015Control (Tissue:root)23.553

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave3.974
SRR9715740Leave2.163
SRR9715741Leave4.754
SRR9715739Root0.126
SRR9715742Root1.785
SRR9715743Root1.687

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h8.711
SRR8749028MeJA induced 9h22.083
SRR8749029MeJA induced 9h12.576
SRR8749030Uninduced5.162
SRR8749031Uninduced8.861
SRR8749032Uninduced5.952

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root8.935
SRR8400027Control-Root7.802

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved