Gene detail information of Glyur000196s00010880.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G66350.1 | 4.00E-66 | RGA-like 1 |
| NR | XP_003545708.1 | 0 | PREDICTED: DELLA protein GAIP-like [Glycine max] |
| Swissprot | tr|Q8S4W7|GAI1_VITVI | 3.00E-76 | DELLA protein GAI1 |
| trEMBL | tr|K7MCT3|K7MCT3_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA15G28410.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00196 | 219460 | 221280 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | GRAS |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene OntologyNot hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000196s00010880.1 | PF03514.9 | GRAS | 210 | 594 | 2.10E-109 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.872 |
| SRR1783600 | control | 0.867 |
| SRR1783602 | moderate drought stress | 0.975 |
| SRR1811619 | moderate drought stress | 1.006 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.654 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.650 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.382 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.333 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.303 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.304 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.362 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.292 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 0.414 |
| SRR2868004 | Drought Stress(Tissue:root) | 0.061 |
| SRR2967015 | Control (Tissue:root) | 0.156 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.641 |
| SRR9715740 | Leave | 0.381 |
| SRR9715741 | Leave | 0.623 |
| SRR9715739 | Root | 0.136 |
| SRR9715742 | Root | 1.266 |
| SRR9715743 | Root | 0.468 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.039 |
| SRR8749028 | MeJA induced 9h | 0.068 |
| SRR8749029 | MeJA induced 9h | 0.096 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.644 |
| SRR8400027 | Control-Root | 0.740 |