Gene detail information of Glyur000197s00010056.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G33720.11.00E-108cytochrome P450, family 76, subfamily C, polypeptide 6
NRKEH43603.10cytochrome P450 family protein [Medicago truncatula]
COGYP_005368416.18.00E-37cytochrome P450 family protein [Corallococcus coralloides DSM 2259]
Swissprottr|Q8VWZ7|C76B6_CATRO2.00E-165Geraniol 8-hydroxylase
trEMBLtr|A0A072VQA6|A0A072VQA6_MEDTR0Cytochrome P450 family protein {ECO:0000313|EMBL:KEH43603.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold0019728845424-


Gene family

Gene familysubfamily
Cytochrome P450 FamilyCYP76C4


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0055114  oxidation-reduction process


molecular_function

GO:0005506  iron ion binding

GO:0016705  oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen

GO:0020037  heme binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000197s00010056.1PF00067.17p450304881.50E-105


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control46.891
SRR1783600control46.978
SRR1783602moderate drought stress55.400
SRR1811619moderate drought stress54.953

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain24.043
DRR006520Root Summer glycyrrhizin high producing strain23.003
DRR006521Root Winter glycyrrhizin high producing strain11.203
DRR006522Root Winter glycyrrhizin high producing strain10.842
DRR006523Root Summer glycyrrhizin low producing strain8.660
DRR006524Root Summer glycyrrhizin low producing strain8.852
DRR006525Leaf Summer glycyrrhizin high producing strain1.494
DRR006526Leaf Summer glycyrrhizin high producing strain1.421

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)46.398
SRR2868004Drought Stress(Tissue:root)65.556
SRR2967015Control (Tissue:root)62.055

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave1.778
SRR9715740Leave2.715
SRR9715741Leave2.060
SRR9715739Root135.051
SRR9715742Root71.642
SRR9715743Root86.949

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h6.218
SRR8749028MeJA induced 9h10.229
SRR8749029MeJA induced 9h3.717
SRR8749030Uninduced8.284
SRR8749031Uninduced6.516
SRR8749032Uninduced4.386

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root58.604
SRR8400027Control-Root50.132

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved