Gene detail information of Glyur000197s00010063.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G34180.1 | 1.00E-88 | NAC domain containing protein 16 |
| NR | XP_004496404.1 | 0 | PREDICTED: NAC domain-containing protein 89-like [Cicer arietinum] |
| Swissprot | tr|Q84K00|NAC78_ARATH | 1.00E-46 | NAC domain-containing protein 78 |
| trEMBL | tr|I1LDA8|I1LDA8_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA10G36360.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00197 | 41399 | 44922 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | NAC |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000197s00010063.1 | PF02365.10 | NAM | 9 | 85 | 5.70E-30 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 12.448 |
| SRR1783600 | control | 12.520 |
| SRR1783602 | moderate drought stress | 15.873 |
| SRR1811619 | moderate drought stress | 15.599 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 34.289 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 34.185 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 52.790 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 51.671 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 55.914 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 56.186 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 15.564 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 15.553 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 40.757 |
| SRR2868004 | Drought Stress(Tissue:root) | 63.229 |
| SRR2967015 | Control (Tissue:root) | 53.281 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 44.745 |
| SRR9715740 | Leave | 51.193 |
| SRR9715741 | Leave | 59.168 |
| SRR9715739 | Root | 31.270 |
| SRR9715742 | Root | 55.085 |
| SRR9715743 | Root | 52.366 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 49.730 |
| SRR8749028 | MeJA induced 9h | 77.652 |
| SRR8749029 | MeJA induced 9h | 51.542 |
| SRR8749030 | Uninduced | 46.075 |
| SRR8749031 | Uninduced | 54.206 |
| SRR8749032 | Uninduced | 57.009 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 29.700 |
| SRR8400027 | Control-Root | 38.406 |