Gene detail information of Glyur000197s00010076.1 |
Functional Annotation
Database | Orthologs | E value | Annotation |
---|
Sequence
Transcript Sequence |
---|
Protein Sequence |
---|
Location information(JBrowse)
Scaffold | Start | End | Strand |
---|---|---|---|
Scaffold00197 | 85738 | 88492 | - |
Gene family
Gene family | subfamily |
---|---|
-- | -- |
KEGG pathway
KO | Enzyme | Enzyme ID | pathway | mapID |
---|---|---|---|---|
K11124 | SMG6, EST1A | EC:3.1.-.- | mRNA surveillance pathway | map03015 |
Gene OntologyNot hits found. |
Pfam domain
Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
---|---|---|---|---|---|
-- | -- | -- | -- | -- |
Expression pattern
SRA Experiment | Description | TPM |
---|---|---|
SRR1783599 | control | 0.183 |
SRR1783600 | control | 0.200 |
SRR1783602 | moderate drought stress | 0.506 |
SRR1811619 | moderate drought stress | 0.472 |
SRA Experiment | Description | TPM |
---|---|---|
DRR006519 | Root Summer glycyrrhizin high producing strain | 0.550 |
DRR006520 | Root Summer glycyrrhizin high producing strain | 0.955 |
DRR006521 | Root Winter glycyrrhizin high producing strain | 1.605 |
DRR006522 | Root Winter glycyrrhizin high producing strain | 1.744 |
DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
DRR006524 | Root Summer glycyrrhizin low producing strain | 0.392 |
DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.089 |
DRR006526 | Leaf Summer glycyrrhizin high producing strain | 6.645 |
SRA Experiment | Description | TPM |
---|---|---|
SRR2867873 | Salt Stress(Tissue:root) | 3.103 |
SRR2868004 | Drought Stress(Tissue:root) | 3.461 |
SRR2967015 | Control (Tissue:root) | 2.091 |
SRA Experiment | Description | TPM |
---|---|---|
SRR9715738 | Leave | 11.157 |
SRR9715740 | Leave | 23.574 |
SRR9715741 | Leave | 11.592 |
SRR9715739 | Root | 0.838 |
SRR9715742 | Root | 0.559 |
SRR9715743 | Root | 0.729 |
SRA Experiment | Description | TPM |
---|---|---|
SRR8749027 | MeJA induced 9h | 1.525 |
SRR8749028 | MeJA induced 9h | 1.233 |
SRR8749029 | MeJA induced 9h | 2.160 |
SRR8749030 | Uninduced | 2.402 |
SRR8749031 | Uninduced | 2.542 |
SRR8749032 | Uninduced | 1.043 |
SRA Experiment | Description | TPM |
---|---|---|
SRR8400026 | NaCl treatment-Root | 3.402 |
SRR8400027 | Control-Root | 2.937 |