Gene detail information of Glyur000197s00010086.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G34110.10Leucine-rich receptor-like protein kinase family protein
NRXP_007143588.10hypothetical protein PHAVU_007G084400g [Phaseolus vulgaris]
COGYP_004775215.14.00E-60RHS repeat-associated core domain-containing protein [Cyclobacterium marinum DSM 745]
Swissprottr|C0LGF5|Y1341_ARATH0Probable LRR receptor-like serine/threonine-protein kinase At1g34110 (Precursor)
trEMBLtr|V7BCI4|V7BCI4_PHAVU0Uncharacterized protein {ECO:0000313|EMBL:ESW15582.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00197117648121263-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.12.4


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005515  protein binding

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000197s00010086.1PF08263.7LRRNT_232768.50E-11
Glyur000197s00010086.1PF13855.1LRR_81061645.10E-07
Glyur000197s00010086.1PF00560.28LRR_13473680.65
Glyur000197s00010086.1PF00560.28LRR_14214390.44
Glyur000197s00010086.1PF13855.1LRR_85375974.20E-08
Glyur000197s00010086.1PF13516.1LRR_66336501
Glyur000197s00010086.1PF13516.1LRR_66566710.35
Glyur000197s00010086.1PF00069.20Pkinase78910502.80E-41


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.112
SRR1783600control0.094
SRR1783602moderate drought stress0.092
SRR1811619moderate drought stress0.101

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain0.033
DRR006520Root Summer glycyrrhizin high producing strain0.023
DRR006521Root Winter glycyrrhizin high producing strain1.496
DRR006522Root Winter glycyrrhizin high producing strain1.428
DRR006523Root Summer glycyrrhizin low producing strain0.136
DRR006524Root Summer glycyrrhizin low producing strain0.136
DRR006525Leaf Summer glycyrrhizin high producing strain0.057
DRR006526Leaf Summer glycyrrhizin high producing strain0.057

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)3.463
SRR2868004Drought Stress(Tissue:root)3.207
SRR2967015Control (Tissue:root)4.524

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave0.103
SRR9715740Leave0.000
SRR9715741Leave0.055
SRR9715739Root0.119
SRR9715742Root0.060
SRR9715743Root0.057

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h4.726
SRR8749028MeJA induced 9h1.257
SRR8749029MeJA induced 9h0.879
SRR8749030Uninduced0.111
SRR8749031Uninduced0.047
SRR8749032Uninduced0.053

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root0.358
SRR8400027Control-Root0.321

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved