Gene detail information of Glyur000198s00008741.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G18770.1 | 2.00E-79 | myb domain protein 98 |
| NR | XP_003525506.1 | 0 | PREDICTED: transcription factor MYB98-like [Glycine max] |
| Swissprot | tr|Q9S7L2|MYB98_ARATH | 3.00E-93 | Transcription factor MYB98 |
| trEMBL | tr|K7KMR3|K7KMR3_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA05G02300.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00198 | 109714 | 112120 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | MYB |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000198s00008741.1 | PF00249.26 | Myb_DNA-binding | 204 | 250 | 1.60E-16 |
| Glyur000198s00008741.1 | PF00249.26 | Myb_DNA-binding | 258 | 298 | 1.40E-15 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.000 |
| SRR1783600 | control | 0.000 |
| SRR1783602 | moderate drought stress | 0.000 |
| SRR1811619 | moderate drought stress | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.071 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.220 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.211 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.681 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.679 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 0.271 |
| SRR2868004 | Drought Stress(Tissue:root) | 0.086 |
| SRR2967015 | Control (Tissue:root) | 0.076 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 1.407 |
| SRR9715740 | Leave | 0.358 |
| SRR9715741 | Leave | 0.633 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.188 |
| SRR8749028 | MeJA induced 9h | 0.045 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.085 |
| SRR8749031 | Uninduced | 0.153 |
| SRR8749032 | Uninduced | 0.057 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.023 |
| SRR8400027 | Control-Root | 0.018 |