Gene detail information of Glyur000198s00008755.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G14750.1 | 1.00E-48 | myb domain protein 66 |
| NR | XP_002279128.2 | 5.18E-71 | PREDICTED: transcription factor WER [Vitis vinifera] |
| Swissprot | tr|Q9SEI0|WER_ARATH | 3.00E-68 | Transcription factor WER |
| trEMBL | tr|D7SHR3|D7SHR3_VITVI | 2.00E-71 | Putative uncharacterized protein {ECO:0000313|EMBL:CBI15023.3} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00198 | 191211 | 192345 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | MYB |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000198s00008755.1 | PF00249.26 | Myb_DNA-binding | 9 | 56 | 1.30E-13 |
| Glyur000198s00008755.1 | PF00249.26 | Myb_DNA-binding | 62 | 107 | 1.10E-14 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.000 |
| SRR1783600 | control | 0.000 |
| SRR1783602 | moderate drought stress | 0.183 |
| SRR1811619 | moderate drought stress | 0.181 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.178 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.173 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 0.068 |
| SRR2868004 | Drought Stress(Tissue:root) | 0.250 |
| SRR2967015 | Control (Tissue:root) | 0.296 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 1.302 |
| SRR9715740 | Leave | 0.101 |
| SRR9715741 | Leave | 0.398 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.099 |
| SRR9715743 | Root | 0.471 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.748 |
| SRR8749028 | MeJA induced 9h | 2.097 |
| SRR8749029 | MeJA induced 9h | 1.880 |
| SRR8749030 | Uninduced | 0.583 |
| SRR8749031 | Uninduced | 0.061 |
| SRR8749032 | Uninduced | 0.138 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.926 |
| SRR8400027 | Control-Root | 1.225 |