Gene detail information of Glyur000198s00008758.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G62400.11.00E-109Protein kinase superfamily protein
NRKHN18460.10Serine/threonine-protein kinase HT1 [Glycine soja]
COGYP_001958461.12.00E-38hypothetical protein Aasi_1443 [Candidatus Amoebophilus asiaticus 5a2]
Swissprottr|Q2MHE4|HT1_ARATH4.00E-134Serine/threonine-protein kinase HT1
trEMBLtr|K7MKQ8|K7MKQ8_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA17G09770.2}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00198212158215543-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:2.1.4


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0004674  protein serine/threonine kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000198s00008758.1PF07714.12Pkinase_Tyr593111.60E-65


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control1.543
SRR1783600control1.603
SRR1783602moderate drought stress2.980
SRR1811619moderate drought stress2.946

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain8.722
DRR006520Root Summer glycyrrhizin high producing strain8.424
DRR006521Root Winter glycyrrhizin high producing strain0.511
DRR006522Root Winter glycyrrhizin high producing strain0.487
DRR006523Root Summer glycyrrhizin low producing strain2.723
DRR006524Root Summer glycyrrhizin low producing strain2.849
DRR006525Leaf Summer glycyrrhizin high producing strain3.801
DRR006526Leaf Summer glycyrrhizin high producing strain3.686

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)1.037
SRR2868004Drought Stress(Tissue:root)0.699
SRR2967015Control (Tissue:root)1.187

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave2.416
SRR9715740Leave1.817
SRR9715741Leave1.008
SRR9715739Root0.794
SRR9715742Root1.637
SRR9715743Root0.753

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.000
SRR8749028MeJA induced 9h0.109
SRR8749029MeJA induced 9h0.000
SRR8749030Uninduced0.000
SRR8749031Uninduced0.000
SRR8749032Uninduced0.000

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root1.992
SRR8400027Control-Root3.973

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved