Gene detail information of Glyur000198s00008763.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G20970.1 | 8.00E-17 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein |
| NR | XP_003525498.1 | 6.95E-104 | PREDICTED: uncharacterized protein LOC100811485 [Glycine max] |
| Swissprot | tr|Q9FLI0|BH120_ARATH | 4.00E-06 | Transcription factor bHLH120 |
| trEMBL | tr|K7KMP7|K7KMP7_SOYBN | 3.00E-104 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA05G02110.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00198 | 242198 | 243515 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | bHLH |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000198s00008763.1 | PF00010.21 | HLH | 16 | 66 | 3.40E-07 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.071 |
| SRR1783600 | control | 0.075 |
| SRR1783602 | moderate drought stress | 0.207 |
| SRR1811619 | moderate drought stress | 0.246 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.609 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.548 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.567 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.226 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 39.179 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 40.300 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 3.618 |
| SRR2868004 | Drought Stress(Tissue:root) | 16.853 |
| SRR2967015 | Control (Tissue:root) | 20.622 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 492.485 |
| SRR9715740 | Leave | 319.058 |
| SRR9715741 | Leave | 673.780 |
| SRR9715739 | Root | 1.844 |
| SRR9715742 | Root | 7.517 |
| SRR9715743 | Root | 7.615 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 16.467 |
| SRR8749028 | MeJA induced 9h | 28.939 |
| SRR8749029 | MeJA induced 9h | 15.501 |
| SRR8749030 | Uninduced | 100.967 |
| SRR8749031 | Uninduced | 28.970 |
| SRR8749032 | Uninduced | 28.518 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 3.714 |
| SRR8400027 | Control-Root | 8.672 |