Gene detail information of Glyur000199s00018198.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G23740.10Leucine-rich repeat protein kinase family protein
NRXP_006596280.10PREDICTED: probable inactive receptor kinase At4g23740-like isoform X1 [Glycine max]
COGYP_003194814.19.00E-23hypothetical protein RB2501_09035 [Robiginitalea biformata HTCC2501]
Swissprottr|Q9SUQ3|Y4374_ARATH0Probable inactive receptor kinase At4g23740 (Precursor)
trEMBLtr|I1MAH0|I1MAH0_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA14G29130.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00199940111900-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.13.3


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005515  protein binding

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000199s00018198.1PF08263.7LRRNT_231663.00E-08
Glyur000199s00018198.1PF00560.28LRR_11902100.26
Glyur000199s00018198.1PF00069.20Pkinase3325941.60E-34


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control3.002
SRR1783600control2.980
SRR1783602moderate drought stress4.409
SRR1811619moderate drought stress4.445

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain6.415
DRR006520Root Summer glycyrrhizin high producing strain6.604
DRR006521Root Winter glycyrrhizin high producing strain0.496
DRR006522Root Winter glycyrrhizin high producing strain0.516
DRR006523Root Summer glycyrrhizin low producing strain7.786
DRR006524Root Summer glycyrrhizin low producing strain7.252
DRR006525Leaf Summer glycyrrhizin high producing strain2.033
DRR006526Leaf Summer glycyrrhizin high producing strain1.924

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)30.453
SRR2868004Drought Stress(Tissue:root)26.677
SRR2967015Control (Tissue:root)30.989

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave1.061
SRR9715740Leave0.430
SRR9715741Leave0.420
SRR9715739Root8.688
SRR9715742Root10.136
SRR9715743Root9.202

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h62.907
SRR8749028MeJA induced 9h58.779
SRR8749029MeJA induced 9h31.048
SRR8749030Uninduced30.711
SRR8749031Uninduced19.366
SRR8749032Uninduced13.380

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root25.580
SRR8400027Control-Root23.855

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved