Gene detail information of Glyur000199s00018224.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G31130.17.00E-45
NRXP_004498373.18.51E-179PREDICTED: uncharacterized protein LOC101496539 [Cicer arietinum]
Swissprottr|Q9FDW1|MYB44_ARATH1.00E-19Transcription factor MYB44
trEMBLtr|A0A072VEN6|A0A072VEN6_MEDTR8.00E-169Transmembrane protein, putative {ECO:0000313|EMBL:KEH40474.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00199171052173515+


Gene family

Gene familysubfamily
Transcription Factors FamilyMYB-related


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

molecular_function

GO:0003677  DNA binding

GO:0003682  chromatin binding



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000199s00018224.1PF00249.26Myb_DNA-binding3994415.10E-15


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control7.037
SRR1783600control7.546
SRR1783602moderate drought stress8.346
SRR1811619moderate drought stress8.723

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain8.049
DRR006520Root Summer glycyrrhizin high producing strain7.810
DRR006521Root Winter glycyrrhizin high producing strain2.310
DRR006522Root Winter glycyrrhizin high producing strain2.379
DRR006523Root Summer glycyrrhizin low producing strain13.822
DRR006524Root Summer glycyrrhizin low producing strain13.510
DRR006525Leaf Summer glycyrrhizin high producing strain24.263
DRR006526Leaf Summer glycyrrhizin high producing strain24.079

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)24.614
SRR2868004Drought Stress(Tissue:root)46.536
SRR2967015Control (Tissue:root)32.763

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave39.569
SRR9715740Leave44.930
SRR9715741Leave62.484
SRR9715739Root27.633
SRR9715742Root38.542
SRR9715743Root36.536

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h8.677
SRR8749028MeJA induced 9h14.197
SRR8749029MeJA induced 9h11.298
SRR8749030Uninduced25.449
SRR8749031Uninduced26.685
SRR8749032Uninduced12.271

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root14.441
SRR8400027Control-Root15.942