Gene detail information of Glyur000200s00011153.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G63710.10Leucine-rich repeat protein kinase family protein
NRXP_003532154.10PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At5g63710-like [Glycine max]
COGYP_708736.14.00E-21protein kinase/ LuxR family transcriptional regulator [Rhodococcus jostii RHA1]
Swissprottr|Q8W4S5|Y5371_ARATH0Probable LRR receptor-like serine/threonine-protein kinase At5g63710 (Precursor)
trEMBLtr|I1KNY9|I1KNY9_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA08G00650.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold002007120875728+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.12.2


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000200s00011153.1PF08263.7LRRNT_237740.00031
Glyur000200s00011153.1PF12799.2LRR_41251622.00E-08
Glyur000200s00011153.1PF00069.20Pkinase2785461.50E-41


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control19.004
SRR1783600control19.238
SRR1783602moderate drought stress19.159
SRR1811619moderate drought stress18.999

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain34.974
DRR006520Root Summer glycyrrhizin high producing strain34.717
DRR006521Root Winter glycyrrhizin high producing strain1.883
DRR006522Root Winter glycyrrhizin high producing strain1.835
DRR006523Root Summer glycyrrhizin low producing strain53.874
DRR006524Root Summer glycyrrhizin low producing strain54.017
DRR006525Leaf Summer glycyrrhizin high producing strain34.652
DRR006526Leaf Summer glycyrrhizin high producing strain34.619

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)43.743
SRR2868004Drought Stress(Tissue:root)76.191
SRR2967015Control (Tissue:root)102.250

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave32.289
SRR9715740Leave39.199
SRR9715741Leave41.983
SRR9715739Root8.212
SRR9715742Root58.989
SRR9715743Root50.651

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h3.121
SRR8749028MeJA induced 9h0.646
SRR8749029MeJA induced 9h2.435
SRR8749030Uninduced0.072
SRR8749031Uninduced0.000
SRR8749032Uninduced0.180

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root51.262
SRR8400027Control-Root51.008

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved