Gene detail information of Glyur000200s00011172.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G01720.14.00E-68NAC (No Apical Meristem) domain transcriptional regulator superfamily protein
NRXP_004503901.11.74E-128PREDICTED: NAC domain-containing protein 2-like [Cicer arietinum]
Swissprottr|Q39013|NAC2_ARATH3.00E-82NAC domain-containing protein 2
trEMBLtr|G7LF13|G7LF13_MEDTR3.00E-125NAC-like transcription factor {ECO:0000313|EMBL:AET04823.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00200194140198344-


Gene family

Gene familysubfamily
Transcription Factors FamilyNAC


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006355  regulation of transcription, DNA-templated


molecular_function

GO:0003677  DNA binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000200s00011172.1PF02365.10NAM7543.10E-15
Glyur000200s00011172.1PF02365.10NAM54952.10E-11


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control5.097
SRR1783600control5.143
SRR1783602moderate drought stress8.013
SRR1811619moderate drought stress7.899

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain42.688
DRR006520Root Summer glycyrrhizin high producing strain41.959
DRR006521Root Winter glycyrrhizin high producing strain83.944
DRR006522Root Winter glycyrrhizin high producing strain84.092
DRR006523Root Summer glycyrrhizin low producing strain106.740
DRR006524Root Summer glycyrrhizin low producing strain107.376
DRR006525Leaf Summer glycyrrhizin high producing strain117.325
DRR006526Leaf Summer glycyrrhizin high producing strain118.552

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)35.796
SRR2868004Drought Stress(Tissue:root)78.256
SRR2967015Control (Tissue:root)103.397

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave492.357
SRR9715740Leave340.739
SRR9715741Leave613.015
SRR9715739Root44.567
SRR9715742Root179.731
SRR9715743Root153.624

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h392.517
SRR8749028MeJA induced 9h618.345
SRR8749029MeJA induced 9h532.999
SRR8749030Uninduced182.926
SRR8749031Uninduced457.633
SRR8749032Uninduced456.569

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root30.372
SRR8400027Control-Root42.443

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved