Gene detail information of Glyur000201s00012373.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G18400.1 | 2.00E-47 | BR enhanced expression 1 |
| NR | XP_007154151.1 | 2.23E-134 | hypothetical protein PHAVU_003G094700g [Phaseolus vulgaris] |
| Swissprot | tr|Q8GZ13|BEE1_ARATH | 6.00E-57 | Transcription factor BEE 1 |
| trEMBL | tr|V7CA67|V7CA67_PHAVU | 8.00E-135 | Uncharacterized protein {ECO:0000313|EMBL:ESW26145.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00201 | 151996 | 153411 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | bHLH |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000201s00012373.1 | PF00010.21 | HLH | 167 | 214 | 7.40E-05 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.130 |
| SRR1783600 | control | 0.116 |
| SRR1783602 | moderate drought stress | 0.464 |
| SRR1811619 | moderate drought stress | 0.452 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.402 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.384 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.270 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.350 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 8.897 |
| SRR2868004 | Drought Stress(Tissue:root) | 7.791 |
| SRR2967015 | Control (Tissue:root) | 7.897 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 2.698 |
| SRR9715740 | Leave | 0.286 |
| SRR9715741 | Leave | 1.249 |
| SRR9715739 | Root | 0.199 |
| SRR9715742 | Root | 1.073 |
| SRR9715743 | Root | 1.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 10.200 |
| SRR8400027 | Control-Root | 8.934 |