Gene detail information of Glyur000201s00012376.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G68320.14.00E-61myb domain protein 62
NRNP_001235789.12.05E-172MYB transcription factor MYB84 [Glycine max]
Swissprottr|Q9LK95|MYB21_ARATH1.00E-58Transcription factor MYB21
trEMBLtr|Q0PJK4|Q0PJK4_SOYBN8.00E-173Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA05G35050.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00201159449160805+


Gene family

Gene familysubfamily
Transcription Factors FamilyMYB


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

molecular_function

GO:0003677  DNA binding

GO:0003682  chromatin binding



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000201s00012376.1PF00249.26Myb_DNA-binding16639.60E-15
Glyur000201s00012376.1PF00249.26Myb_DNA-binding701122.20E-13


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control6.144
SRR1783600control6.262
SRR1783602moderate drought stress8.236
SRR1811619moderate drought stress8.176

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain4.010
DRR006520Root Summer glycyrrhizin high producing strain4.662
DRR006521Root Winter glycyrrhizin high producing strain10.113
DRR006522Root Winter glycyrrhizin high producing strain9.843
DRR006523Root Summer glycyrrhizin low producing strain2.791
DRR006524Root Summer glycyrrhizin low producing strain2.772
DRR006525Leaf Summer glycyrrhizin high producing strain0.670
DRR006526Leaf Summer glycyrrhizin high producing strain0.570

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)2.085
SRR2868004Drought Stress(Tissue:root)6.124
SRR2967015Control (Tissue:root)1.578

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave39.011
SRR9715740Leave14.910
SRR9715741Leave61.665
SRR9715739Root2.598
SRR9715742Root3.795
SRR9715743Root4.791

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h22.996
SRR8749028MeJA induced 9h17.358
SRR8749029MeJA induced 9h8.634
SRR8749030Uninduced85.603
SRR8749031Uninduced35.321
SRR8749032Uninduced55.707

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root13.866
SRR8400027Control-Root10.971

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved