Gene detail

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Gene detail information of Glyur000201s00012390.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT5G38260.1	3.00E-116	Protein kinase superfamily protein
NR	KHN16550.1	0	Putative receptor-like protein kinase [Glycine soja]
COG	YP_001958461.1	1.00E-24	hypothetical protein Aasi_1443 [Candidatus Amoebophilus asiaticus 5a2]
Swissprot	tr\|Q3ECH2\|Y1670_ARATH	1.00E-127	Probable receptor-like protein kinase At1g67000 (Precursor)
trEMBL	tr\|K7L4Y7\|K7L4Y7_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA08G04911.1}

Sequence

Transcript Sequence

>Glyur000201s00012390.1
GTTGAATTAATCATATATGATGATATATATCTCCAACAACAACAACAACAACAACTCTGATTAACACATACATACATGTTCCCCATGTTCAAACTTGCAATTGCATGCTTTATCTCTGCTTTGTTTCACTTCTTCACCCATTCCTCTGGCACCAACAACACCACTGCAATTTGTCCCACTTACCAATGCAAAAATGGACCAAAAATCAGTTACCCTTTCTGGCTGTCACAAGGTTCCCCTCCTGACCAATACTGTGGTTACCATGACCTTGGCCTTATCTGCCTCGACCATGGTGACACTATTTTCGCACCTCTCGGGTTATACTACTACGTCAAAGACATAGACTATGAAAACCGTAGTCTTAAACTAGTTGATTTCGACACCGTAAACCAAACTTGTCCAAGGGCACTTCACAATGTTCCACTGGGTAACCTACCACTTACCCACTCCCCCTTGAACTTAAACCTTCCCTTTTATTACAACTGCAGTAACTACCCCTCTGAATATAATGATGTATCTTCCATCGAGTGTCTGAAATCTGGAGCAAATGAGTCTTTTGTGTTTGAGACTGAGAATGCTAATGANGGTTTTGACTGGTCTGGGAATTGTGCTGAAAAAGTTGTGGTGACAGTGATGAAGGATCAGGTTACGAGTGAAGGGTTGGTGAATGAGTTTGCTGGGGCTATGAGTGAAGGATTCGTGCTTGATTGGCAAACAGCTTCGAATTGCGCTGAGTGTGAGGCCAGTGGTGGACTCTGTGGCTACAATAACACCAGGAAAGAGTTGCTCTGTTTTTGCAAGGATGGCAGCACAAGAACCAATGACTGTAAAGTGGCAGAGGGAAGCAGCACCGGTTTGTCAAGACTAGTTATAGGTTTAATAGCTGGAGGAGTTGGAGCATTGCTGCTGATATGCATCATACTTTGCTGTTTTATACGGAAACTATTGTCAATTGTGTCAGAATTTCGGAAGACCAAAAAAGTTGATCAAGATATTGAGGCCTTCATCAGAAACAATGGACCTCCAGCCATAAAAAGATACTCATACTCAGAGATCAAGAAAGTTACCAATTCTTTCGAATCCAAGCTTGGACAAGGTGGTTATGGTCAAGTATATAAAGGACATGTAAGCAACAATTGTCCCGTGGCCGTGAAGGTACTGAATGCTTCCAAAGGGAACGGAGAGGAATTCATCAATGAGGTTGTGAGCATAGGTAGAACATCCCATGTAAACATTGTTAATCTGCTTGGTTTCTGTCTTGAAGGCCAAAAGAAAGCTCTTGTCTACGAATTTATGCCTAATGGATCACTTGAAAAGTTTGTACACAACAATAATTTTGAAACAAACCCACCTTTGAGTTGGGAGAGATTACACCAGATTGCAGAAGGGATAGCTAAAGGATTGGAGTACTTGCACAAGGGGTGCAACACTAGGATATTACACTTTGACATAAAACCAAGCAACATCCTTTTGGATAAAAATTTCTGCCCAAAAATCTCTGATTTTGGGTTGGCCAAGCTTTGTTCAAAAACAAAAAGTATCGTTTCTATGCTAGATGCTAGAGGGACAGTTGGGTATATAGCTCCAGAAATATGGAACAGAAATTTCGGAGGAGTGTCACATAAGTCTGATGTGTATAGTTATGGAATGTTGATTTTGGAAATTGTAGGGGGAAGGCAAAACATTAGTGCTGAAGAAGAAGCATGCCACTCTAGCGAAACATATTTTCCTCATTGGATATACAAGCACATTGAAGTGGGCAAAGATTTAACATGGCATGATGGTATGACCCAAGAGGAAAATGAAATTTGTAAGAAAATGATTATGATTGGATTATGGTGCATACAGACCATACCATCTGAGAGACCTCCAATGAGTAAGGTGGTTGAAATGTTAGAAGGAAGCATAGAACAGTTGCAAATCCCACCAAGGCCATTCATATTTTCTCCTACAAAAACCGAAGTGGAATCTTGCACCACC

Protein Sequence

Location information(JBrowse)

Scaffold	Start	End	Strand
Scaffold00201	249084	251577	+

Gene family

Gene family	subfamily
Protein Kinases Family	PPC:1.9.1

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006468 protein phosphorylation

molecular_function GO:0004672 protein kinase activity GO:0005524 ATP binding GO:0016772 transferase activity, transferring phosphorus-containing groups

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000201s00012390.1	PF14380.1	WAK_assoc	152	244	5.90E-18
Glyur000201s00012390.1	PF07714.12	Pkinase_Tyr	334	607	1.60E-47

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.440
SRR1783600	control	0.442
SRR1783602	moderate drought stress	0.670
SRR1811619	moderate drought stress	0.678

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.109
DRR006520	Root Summer glycyrrhizin high producing strain	0.108
DRR006521	Root Winter glycyrrhizin high producing strain	0.000
DRR006522	Root Winter glycyrrhizin high producing strain	0.000
DRR006523	Root Summer glycyrrhizin low producing strain	0.166
DRR006524	Root Summer glycyrrhizin low producing strain	0.165
DRR006525	Leaf Summer glycyrrhizin high producing strain	3.223
DRR006526	Leaf Summer glycyrrhizin high producing strain	3.227

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress(Tissue:root)	0.727
SRR2868004	Drought Stress(Tissue:root)	3.712
SRR2967015	Control (Tissue:root)	0.832

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leave	24.543
SRR9715740	Leave	23.192
SRR9715741	Leave	31.497
SRR9715739	Root	0.272
SRR9715742	Root	0.606
SRR9715743	Root	0.362

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	1.397
SRR8749028	MeJA induced 9h	11.318
SRR8749029	MeJA induced 9h	9.196
SRR8749030	Uninduced	12.141
SRR8749031	Uninduced	21.888
SRR8749032	Uninduced	9.099

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment-Root	0.459
SRR8400027	Control-Root	0.574