Gene detail

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Gene detail information of Glyur000202s00015391.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT3G62860.1	6.00E-117	alpha/beta-Hydrolases superfamily protein
NR	XP_004495953.1	0	PREDICTED: monoglyceride lipase-like isoform X1 [Cicer arietinum]
COG	YP_003571913.1	8.00E-39	lysophospholipase [Salinibacter ruber M8]
Swissprot	tr\|Q9C942\|CSE_ARATH	7.00E-60	Caffeoylshikimate esterase
trEMBL	tr\|G7IF52\|G7IF52_MEDTR	3.00E-174	Alpha/beta hydrolase family protein {ECO:0000313\|EMBL:AES61771.1}

Sequence

Transcript Sequence

>Glyur000202s00015391.1
GGATACTGGAATAATTCAAGGGGAGTGCAACTCTTCACCTGCAAGTGGTTGCCTTTTTCTGATCCCAAGGCTCTTGTTTTCCTTTGCCATGGTACAATTCTCTTTTCCCTCCTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTACTTGGTGTATAGTTATGGAATGGAATGCAGTAGATTCATGAGAGGATGTGGAGTGAAGTTTGCGTCTGCGGGATATGCTGTGTTCGGGTTGGATGTTGAAGGACATGGACGCTCTGCAGGTGTTCGTTGTCTCATAACCAAGTTTGACAACATTGTTAACGATGCTTCCGACTATTTCAAGTCAATTTGCGAGCTCCAAGAGTACAAGGGAAAGGCCAAGTTTTTGTATGGAGAGTCAATGGGAGGAGCAGTGAGCCTACTTTTGCATAGAAAGGACCCTTCATTCTGGGACGGAGCACTTCTTGTTGCACCCATGTGTAAGATATCAGAGAAGATGATGCCACATCCTGTTGCTGTGAGCATATTGACTGGATTGGAAACTTTTATTCCAAAGTGGAAGATAGTTCCCACAAAGGATGTCATCGATTCAGGCTTCAAAGATCCTGCCAAACGGGAAACGATAAGGGCAAACAAGTTGATATACCAGGACAAGCCCAGGTTGAAAACATCATTGGAACTGCTGAGAGCCAGCTCGAGTCTTGAAAACAGCTTACATGAGGTGACACTGCCGTTCTTATTGTTGCATGGAGAGCTAGATACAGTGACAGACCCAGAAGTAAGCAAGGCATTATATGAGCGAGCCAGTAGTGTAGACAAGACCATGAAATTGTACCCAGGAATGTGGCATGGCTTAACCAATGGGGAACCCGATGAAAACATCGAAATTGTCTTTGCAGACATCATAGCTTGGCTGGACAAGCGTGCTACGAGCAAGGCACAGGTTGAGTCTTATCTACCGAGTCAAACTTTAAAACATGGCAATGTTGATGACTTGCAAGAACGCCGGGCATCACTGTAG

Protein Sequence

Location information(JBrowse)

Scaffold	Start	End	Strand
Scaffold00202	56705	61048	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
K01054	MGLL	EC:3.1.1.23	Glycerolipid metabolism	map00561
			Regulation of lipolysis in adipocyte	map04923
			Retrograde endocannabinoid signaling	map04723

Gene Ontology

Not hits found.

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000202s00015391.1	PF12695.2	Abhydrolase_5	58	277	6.60E-16

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.370
SRR1783600	control	0.368
SRR1783602	moderate drought stress	0.277
SRR1811619	moderate drought stress	0.374

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.859
DRR006520	Root Summer glycyrrhizin high producing strain	0.669
DRR006521	Root Winter glycyrrhizin high producing strain	0.085
DRR006522	Root Winter glycyrrhizin high producing strain	0.216
DRR006523	Root Summer glycyrrhizin low producing strain	0.784
DRR006524	Root Summer glycyrrhizin low producing strain	1.087
DRR006525	Leaf Summer glycyrrhizin high producing strain	0.531
DRR006526	Leaf Summer glycyrrhizin high producing strain	0.623

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress(Tissue:root)	2.978
SRR2868004	Drought Stress(Tissue:root)	3.559
SRR2967015	Control (Tissue:root)	5.785

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leave	0.141
SRR9715740	Leave	0.315
SRR9715741	Leave	0.131
SRR9715739	Root	0.868
SRR9715742	Root	0.349
SRR9715743	Root	0.273

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	2.991
SRR8749028	MeJA induced 9h	1.868
SRR8749029	MeJA induced 9h	5.344
SRR8749030	Uninduced	3.691
SRR8749031	Uninduced	3.656
SRR8749032	Uninduced	1.902

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment-Root	0.565
SRR8400027	Control-Root	1.399