Gene detail information of Glyur000202s00015403.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G02390.10poly(ADP-ribose) polymerase
NRXP_004495943.10PREDICTED: poly [ADP-ribose] polymerase 2-like [Cicer arietinum]
COGYP_001547522.16.00E-12Poly(ADP-ribose) polymerase catalytic subunit [Herpetosiphon aurantiacus DSM 785]
Swissprottr|Q5Z8Q9|PRP2A_ORYSJ0Poly [ADP-ribose] polymerase 2-A
trEMBLtr|A0A072VMZ9|A0A072VMZ9_MEDTR0Poly(ADP-ribose) polymerase domain protein {ECO:0000313|EMBL:KEH43217.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00202100536107207-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K10798PARP EC:2.4.2.30 Base excision repair map03410
Apoptosismap04210
Apoptosis - flymap04214
Longevity regulating pathway - wormmap04212


Gene Ontology

biological_process

GO:0006471  protein ADP-ribosylation


molecular_function

GO:0003950  NAD+ ADP-ribosyltransferase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000202s00015403.1PF02037.22SAP4371.70E-10
Glyur000202s00015403.1PF05406.10WGR1302123.70E-25
Glyur000202s00015403.1PF02877.9PARP_reg2493829.30E-44
Glyur000202s00015403.1PF00644.15PARP3844391.10E-10
Glyur000202s00015403.1PF00644.15PARP4445796.00E-45


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control1.022
SRR1783600control1.106
SRR1783602moderate drought stress0.531
SRR1811619moderate drought stress0.560

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain0.745
DRR006520Root Summer glycyrrhizin high producing strain0.748
DRR006521Root Winter glycyrrhizin high producing strain0.840
DRR006522Root Winter glycyrrhizin high producing strain0.868
DRR006523Root Summer glycyrrhizin low producing strain0.409
DRR006524Root Summer glycyrrhizin low producing strain0.345
DRR006525Leaf Summer glycyrrhizin high producing strain1.778
DRR006526Leaf Summer glycyrrhizin high producing strain1.785

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)4.246
SRR2868004Drought Stress(Tissue:root)3.115
SRR2967015Control (Tissue:root)3.052

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave2.216
SRR9715740Leave1.951
SRR9715741Leave1.081
SRR9715739Root0.446
SRR9715742Root0.749
SRR9715743Root0.750

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h6.659
SRR8749028MeJA induced 9h5.353
SRR8749029MeJA induced 9h6.928
SRR8749030Uninduced0.965
SRR8749031Uninduced0.262
SRR8749032Uninduced0.600

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root4.572
SRR8400027Control-Root4.422

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved