Gene detail information of Glyur000203s00012871.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G42250.14.00E-107Zinc-binding alcohol dehydrogenase family protein
NRXP_004501981.13.15E-162PREDICTED: alcohol dehydrogenase-like 7-like [Cicer arietinum]
COGYP_008046593.11.00E-64alcohol dehydrogenase GroES-like protein [Spiribacter salinus M19-40]
Swissprottr|Q9FH04|ADHL7_ARATH1.00E-128Alcohol dehydrogenase-like 7
trEMBLtr|I1NE11|I1NE11_SOYBN1.00E-157Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA20G10240.2}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00203653614799+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00121frmA, ADH5, adhC EC:1.1.1.284 1.1.1.1 Carbon metabolism map01200
Degradation of aromatic compoundsmap01220
Glycolysis / Gluconeogenesismap00010
Methane metabolismmap00680
Fatty acid degradationmap00071
Tyrosine metabolismmap00350
Retinol metabolismmap00830
Chloroalkane and chloroalkene degradationmap00625
Naphthalene degradationmap00626
Metabolism of xenobiotics by cytochrome P450map00980
Drug metabolism - cytochrome P450map00982
Chemical carcinogenesismap05204


Gene Ontology

biological_process

GO:0055114  oxidation-reduction process


molecular_function

GO:0008270  zinc ion binding

GO:0016491  oxidoreductase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000203s00012871.1PF08240.7ADH_N2843.90E-22
Glyur000203s00012871.1PF00107.21ADH_zinc_N1382613.40E-19
Glyur000203s00012871.1PF08240.7ADH_N2633514.00E-08
Glyur000203s00012871.1PF00107.21ADH_zinc_N3955069.40E-13


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control1.387
SRR1783600control1.362
SRR1783602moderate drought stress1.967
SRR1811619moderate drought stress2.111

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain3.577
DRR006520Root Summer glycyrrhizin high producing strain3.407
DRR006521Root Winter glycyrrhizin high producing strain6.808
DRR006522Root Winter glycyrrhizin high producing strain6.533
DRR006523Root Summer glycyrrhizin low producing strain6.063
DRR006524Root Summer glycyrrhizin low producing strain6.006
DRR006525Leaf Summer glycyrrhizin high producing strain8.442
DRR006526Leaf Summer glycyrrhizin high producing strain8.503

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)4.152
SRR2868004Drought Stress(Tissue:root)5.438
SRR2967015Control (Tissue:root)5.250

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave12.377
SRR9715740Leave13.132
SRR9715741Leave9.904
SRR9715739Root4.488
SRR9715742Root4.783
SRR9715743Root4.506

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h5.312
SRR8749028MeJA induced 9h5.126
SRR8749029MeJA induced 9h4.938
SRR8749030Uninduced2.252
SRR8749031Uninduced0.726
SRR8749032Uninduced0.973

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root6.335
SRR8400027Control-Root7.579

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved