Gene detail information of Glyur000203s00012896.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G17770.12.00E-121NADH:cytochrome B5 reductase 1
NRKHN26281.10NADH-cytochrome b5 reductase 1 [Glycine soja]
COGYP_003474183.12.00E-22oxidoreductase FAD-binding domain-containing protein [Thermocrinis albus DSM 14484]
Swissprottr|Q9ZNT1|NB5R1_ARATH2.00E-152NADH--cytochrome b5 reductase 1
trEMBLtr|G7J636|G7J636_MEDTR0NADH-cytochrome b5 reductase {ECO:0000256|RuleBase:RU361226}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00203154483157410+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00326E1.6.2.2 EC:1.6.2.2 Amino sugar and nucleotide sugar metabolism map00520


Gene Ontology

biological_process

GO:0055114  oxidation-reduction process


molecular_function

GO:0016491  oxidoreductase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000203s00012896.1PF00970.19FAD_binding_6471459.80E-29
Glyur000203s00012896.1PF00175.16NAD_binding_11552613.10E-28


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control9.942
SRR1783600control10.244
SRR1783602moderate drought stress6.036
SRR1811619moderate drought stress6.191

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain0.475
DRR006520Root Summer glycyrrhizin high producing strain0.496
DRR006521Root Winter glycyrrhizin high producing strain1.525
DRR006522Root Winter glycyrrhizin high producing strain1.403
DRR006523Root Summer glycyrrhizin low producing strain1.686
DRR006524Root Summer glycyrrhizin low producing strain1.557
DRR006525Leaf Summer glycyrrhizin high producing strain5.749
DRR006526Leaf Summer glycyrrhizin high producing strain5.848

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)8.590
SRR2868004Drought Stress(Tissue:root)9.676
SRR2967015Control (Tissue:root)7.839

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave22.873
SRR9715740Leave35.957
SRR9715741Leave42.561
SRR9715739Root7.363
SRR9715742Root8.828
SRR9715743Root8.547

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h15.991
SRR8749028MeJA induced 9h27.929
SRR8749029MeJA induced 9h10.773
SRR8749030Uninduced21.418
SRR8749031Uninduced13.509
SRR8749032Uninduced6.548

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root26.443
SRR8400027Control-Root22.162

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved