Gene detail information of Glyur000203s00012898.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G02970.1 | 2.00E-65 | GDA1/CD39 nucleoside phosphatase family protein |
| NR | XP_006575168.1 | 0 | PREDICTED: probable apyrase 6-like [Glycine max] |
| COG | YP_007568778.1 | 2.00E-11 | hypothetical protein LPE509_02235 [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] |
| Swissprot | tr|O80612|APY6_ARATH | 6.00E-82 | Probable apyrase 6 |
| trEMBL | tr|K7K8U9|K7K8U9_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA02G25772.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00203 | 174991 | 182039 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| K01510 | ENTPD1_3_8, CD39 | EC:3.6.1.5 | Purine metabolism | map00230 |
| Pyrimidine metabolism | map00240 | |||
| Epstein-Barr virus infection | map05169 |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000203s00012898.1 | PF01150.12 | GDA1_CD39 | 199 | 466 | 4.00E-27 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 4.064 |
| SRR1783600 | control | 4.016 |
| SRR1783602 | moderate drought stress | 3.945 |
| SRR1811619 | moderate drought stress | 3.801 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 6.143 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 5.836 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 5.484 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 5.472 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 10.809 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 10.322 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.089 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.985 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 8.422 |
| SRR2868004 | Drought Stress(Tissue:root) | 9.020 |
| SRR2967015 | Control (Tissue:root) | 10.637 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 6.143 |
| SRR9715740 | Leave | 5.999 |
| SRR9715741 | Leave | 7.199 |
| SRR9715739 | Root | 3.343 |
| SRR9715742 | Root | 5.593 |
| SRR9715743 | Root | 5.473 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 3.494 |
| SRR8749028 | MeJA induced 9h | 6.311 |
| SRR8749029 | MeJA induced 9h | 3.017 |
| SRR8749030 | Uninduced | 3.471 |
| SRR8749031 | Uninduced | 3.646 |
| SRR8749032 | Uninduced | 3.303 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 8.342 |
| SRR8400027 | Control-Root | 10.790 |