Gene detail information of Glyur000203s00012904.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G58830.1 | 4.00E-94 | haloacid dehalogenase (HAD) superfamily protein |
| NR | KHN31077.1 | 0 | Phosphatidylglycerophosphatase GEP4, mitochondrial [Glycine soja] |
| COG | YP_004642588.1 | 6.00E-12 | HAD superfamily phosphatase [Paenibacillus mucilaginosus KNP414] |
| trEMBL | tr|I1JWJ8|I1JWJ8_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA04G29890.5} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00203 | 215133 | 219447 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| K01094 | GEP4 | EC:3.1.3.27 | Glycerophospholipid metabolism | map00564 |
Gene OntologyNot hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000203s00012904.1 | PF09419.5 | PGP_phosphatase | 152 | 306 | 2.00E-43 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 6.624 |
| SRR1783600 | control | 6.498 |
| SRR1783602 | moderate drought stress | 6.678 |
| SRR1811619 | moderate drought stress | 6.655 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 8.725 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 8.632 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 5.685 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 5.408 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 9.148 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 9.081 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 14.477 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 14.635 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 5.001 |
| SRR2868004 | Drought Stress(Tissue:root) | 5.316 |
| SRR2967015 | Control (Tissue:root) | 5.744 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 15.054 |
| SRR9715740 | Leave | 19.725 |
| SRR9715741 | Leave | 10.983 |
| SRR9715739 | Root | 1.404 |
| SRR9715742 | Root | 5.093 |
| SRR9715743 | Root | 2.657 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 9.939 |
| SRR8749028 | MeJA induced 9h | 9.227 |
| SRR8749029 | MeJA induced 9h | 5.609 |
| SRR8749030 | Uninduced | 9.744 |
| SRR8749031 | Uninduced | 2.827 |
| SRR8749032 | Uninduced | 1.287 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 6.767 |
| SRR8400027 | Control-Root | 7.699 |