Gene detail information of Glyur000204s00012406.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G62710.1 | 1.00E-166 | Leucine-rich repeat protein kinase family protein |
| NR | XP_004508778.1 | 0 | PREDICTED: LRR receptor-like serine/threonine-protein kinase FEI 1-like isoform X1 [Cicer arietinum] |
| COG | YP_001192956.1 | 4.00E-14 | two component regulator [Flavobacterium johnsoniae UW101] |
| Swissprot | tr|C0LGF4|FEI1_ARATH | 4.00E-96 | LRR receptor-like serine/threonine-protein kinase FEI 1 (Precursor) |
| trEMBL | tr|I1JZT1|I1JZT1_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA05G01420.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00204 | 148448 | 152872 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Protein Kinases Family | PPC:1.12.2 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000204s00012406.1 | PF08263.7 | LRRNT_2 | 28 | 65 | 5.70E-11 |
| Glyur000204s00012406.1 | PF13855.1 | LRR_8 | 94 | 152 | 1.60E-07 |
| Glyur000204s00012406.1 | PF07714.12 | Pkinase_Tyr | 287 | 371 | 8.60E-11 |
| Glyur000204s00012406.1 | PF00069.20 | Pkinase | 373 | 467 | 1.50E-05 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 4.113 |
| SRR1783600 | control | 3.999 |
| SRR1783602 | moderate drought stress | 2.453 |
| SRR1811619 | moderate drought stress | 2.538 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 8.021 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 7.519 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.700 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.135 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.919 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.960 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 13.834 |
| SRR2868004 | Drought Stress(Tissue:root) | 6.871 |
| SRR2967015 | Control (Tissue:root) | 7.584 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 1.324 |
| SRR9715740 | Leave | 0.033 |
| SRR9715741 | Leave | 0.335 |
| SRR9715739 | Root | 1.909 |
| SRR9715742 | Root | 2.893 |
| SRR9715743 | Root | 2.404 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 23.468 |
| SRR8749028 | MeJA induced 9h | 8.782 |
| SRR8749029 | MeJA induced 9h | 9.042 |
| SRR8749030 | Uninduced | 0.870 |
| SRR8749031 | Uninduced | 1.148 |
| SRR8749032 | Uninduced | 0.692 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 9.383 |
| SRR8400027 | Control-Root | 9.420 |