Gene detail information of Glyur000204s00012420.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G62530.10aldehyde dehydrogenase 12A1
NRXP_007155331.10hypothetical protein PHAVU_003G192100g [Phaseolus vulgaris]
COGYP_004719251.11.00E-24aldehyde dehydrogenase [Sulfobacillus acidophilus TPY]
Swissprottr|Q40255|ALDH_LINUS0Probable aldehyde dehydrogenase
trEMBLtr|V7CDG3|V7CDG3_PHAVU0Uncharacterized protein {ECO:0000313|EMBL:ESW27325.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00204209439216762-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00294E1.2.1.88 EC:1.2.1.88 Alanine, aspartate and glutamate metabolism map00250
Arginine and proline metabolismmap00330


Gene Ontology

biological_process

GO:0008152  metabolic process

GO:0055114  oxidation-reduction process


molecular_function

GO:0016491  oxidoreductase activity

GO:0016620  oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000204s00012420.1PF00171.17Aldedh1194591.10E-33


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control14.322
SRR1783600control14.418
SRR1783602moderate drought stress13.295
SRR1811619moderate drought stress12.744

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain23.488
DRR006520Root Summer glycyrrhizin high producing strain23.490
DRR006521Root Winter glycyrrhizin high producing strain18.188
DRR006522Root Winter glycyrrhizin high producing strain17.207
DRR006523Root Summer glycyrrhizin low producing strain19.325
DRR006524Root Summer glycyrrhizin low producing strain19.494
DRR006525Leaf Summer glycyrrhizin high producing strain6.725
DRR006526Leaf Summer glycyrrhizin high producing strain6.686

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)50.022
SRR2868004Drought Stress(Tissue:root)50.551
SRR2967015Control (Tissue:root)46.623

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave23.845
SRR9715740Leave16.511
SRR9715741Leave27.631
SRR9715739Root5.218
SRR9715742Root21.497
SRR9715743Root19.608

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h45.884
SRR8749028MeJA induced 9h42.818
SRR8749029MeJA induced 9h46.319
SRR8749030Uninduced58.241
SRR8749031Uninduced145.861
SRR8749032Uninduced82.942

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root44.277
SRR8400027Control-Root35.625

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved