Gene detail

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Gene detail information of Glyur000205s00012953.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT5G23190.1	0	cytochrome P450, family 86, subfamily B, polypeptide 1
NR	XP_003538960.2	0	PREDICTED: cytochrome P450 86B1-like [Glycine max]
COG	YP_001832924.1	4.00E-34	cytochrome P450 [Beijerinckia indica subsp. indica ATCC 9039]
Swissprot	tr\|Q9FMY1\|C86B1_ARATH	0	Cytochrome P450 86B1
trEMBL	tr\|I1LIR9\|I1LIR9_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA11G10640.1}

Sequence

Transcript Sequence

>Glyur000205s00012953.1
ATGATGACCAAACCAAACAATAATCTCAATCTCAATCTCAACCTCAACCTCACCTCTGGCTGCTCCTCATTCTTCCCTCTAATTGCCGCCAGATCAAACTTGTGTTCCCTNAGCCTCTTCCTCATGCAAGACATCCAATTTTTGGAGATTCTTATTGCATTAATTGTCTTCATAGTTATTCGTTCCCTCAGGCANAAGAAGCATCAAGGCCTACCCATTTGGCCTATTCTTGGAATGTTGCCTTCTTTGCTCATAACTGGACTCAGAACCAATTTGTATGAATGGATCACTGATGTCCTCAACAGACAAAATGGGACATTTAGATTCAAAGGGCCTTGGTTTAGCAGCCTCAACTGCATAGTCACCTCTGATCCTCGCAACCTTGAGCACCTTCTCAAAACCAAGTTCCCTTTGTTCCCTAAAGGGAGTTACTTCAGGAACACAGTTAGAGACCTACTTGGAGATGGCATATTNAATGCNGACGANGAGACGTGGCAGAAGCAAAGGAANACAGCAAGCATTGAGTTCCATTCAACAAAGTTCAGGCAATTAACAACTGAGTCCCTATTCCAGCTTGTCCACTCAAGGCTCTTACCTGTCTTGGATTCATCAGTTGAGGAATCTGTTGCTATAGACCTTCAAGACATCCTTTTGAGGNTAACTTTTGATAATGTGTGCATGATAGCCTTTGGTGTTGATCCTGGTTGTTTGAGCCTGGGGTTGCCTGAGATACCATTTGCTAGAGCCTTTGAGGATGCAACAGAAGCCACGGTGCTTCGCTTTGTCACCCCGACTTGTGTGTGGAAGGCCATGAGGTTTCTCAACTTGGGGGTGGAANGGAANCTGAAGGAATCAATAAANGGNGTTGATGAATTTNCTGANAGTGTTATTCACACCAGAAAAAAGGAGCTGTCTTTGGAATGTGAGGACAACAAGCAAAGGTCAGACTTATTAACAGTGTTTATGAAGATGAAGGATGAGAATGGAGAACCATATTCAGATAAGTTCTTGAGGGATATATGTGTGAACTTCATATTAGCAGGGAGGGACACTTCTTCTGTGGCTCTGAGCTGGTTTTTTTGGTTGCTTGATCAGAACCCTGAAGTGGAGGAGAAGATACTGGCAGAGATATGCAGGGTGGTGGTTAGTCAGAGGAAAGACAGAAAGAAGGAAGAGTTTGAAGATTCTTTGATATTTAGGCCTGAGGAGATNAAAAAGATGGATTATTTGCATGCTGCTTTATCAGAAGCTCTGAGATTATACCCTTCTGTGCCTGTGGATCACAAGGAGGTAGTTGAGGATAATACATTCCCAGATGGAACAGTGCTAAAGAAGGGAACAAAAGTGATCTATGCAATTTATGCAATGGGAAGAATGGAAAGCATATGGGGCAAGNATTGCAGGGAGTTCAAGCCAGAAAGATGGTTAAGAGATGGCAAGTTCATGAGTGAATCTGCCTACAAATTCACTGCCTTCAATGGTGGGCCCCGCCTCTGCTTAGGCAAAGATTTTGCATACTACCAGATGAAATATGTTGCTGCCACCATCATATACCACTACCATGTCAAGGTGGTAGAGAACCACTCTGTGGTGCCAAAGCTGGCCTTGACTATGTACATGAAGCATGGAATCAAAGTTAACCTCTACAAGAGGGATGCTACACAAATTCAAAAACACTTGGATGATTGGTGTACATGA

Protein Sequence

Location information(JBrowse)

Scaffold	Start	End	Strand
Scaffold00205	194380	196725	+

Gene family

Gene family	subfamily
Cytochrome P450 Family	CYP86B1
EAR motif-containing Proteins	other

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
K15402	CYP86B1	EC:1.14.-.-	Cutin, suberine and wax biosynthesis	map00073

Gene Ontology

biological_process
GO:0055114 oxidation-reduction process

molecular_function GO:0005506 iron ion binding GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GO:0020037 heme binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000205s00012953.1	PF00067.17	p450	74	537	1.10E-67

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	4.230
SRR1783600	control	4.276
SRR1783602	moderate drought stress	3.247
SRR1811619	moderate drought stress	3.303

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.000
DRR006520	Root Summer glycyrrhizin high producing strain	0.063
DRR006521	Root Winter glycyrrhizin high producing strain	0.000
DRR006522	Root Winter glycyrrhizin high producing strain	0.000
DRR006523	Root Summer glycyrrhizin low producing strain	0.035
DRR006524	Root Summer glycyrrhizin low producing strain	0.064
DRR006525	Leaf Summer glycyrrhizin high producing strain	0.164
DRR006526	Leaf Summer glycyrrhizin high producing strain	0.239

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress(Tissue:root)	34.778
SRR2868004	Drought Stress(Tissue:root)	18.497
SRR2967015	Control (Tissue:root)	13.167

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leave	0.064
SRR9715740	Leave	1.638
SRR9715741	Leave	0.852
SRR9715739	Root	7.177
SRR9715742	Root	5.795
SRR9715743	Root	6.649

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.105
SRR8749028	MeJA induced 9h	0.098
SRR8749029	MeJA induced 9h	0.000
SRR8749030	Uninduced	0.345
SRR8749031	Uninduced	2.046
SRR8749032	Uninduced	0.194

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment-Root	31.032
SRR8400027	Control-Root	22.359