Gene detail information of Glyur000206s00012574.2


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G57650.14.00E-152lysophosphatidyl acyltransferase 2
NRXP_003535857.10PREDICTED: 1-acyl-sn-glycerol-3-phosphate acyltransferase 2-like [Glycine max]
COGYP_003981613.17.00E-06acyltransferase [Achromobacter xylosoxidans A8]
Swissprottr|Q8LG50|LPAT2_ARATH01-acyl-sn-glycerol-3-phosphate acyltransferase 2
trEMBLtr|I1L9X2|I1L9X2_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA10G12560.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold002066351169658+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K13523AGPAT3_4 EC:2.3.1.51 2.3.1.- Glycerolipid metabolism map00561
Glycerophospholipid metabolismmap00564
Phospholipase D signaling pathwaymap04072


Gene Ontology

biological_process

GO:0008152  metabolic process


molecular_function

GO:0016746  transferase activity, transferring acyl groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000206s00012574.2PF01553.16Acyltransferase832282.70E-16


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control20.033
SRR1783600control20.745
SRR1783602moderate drought stress21.993
SRR1811619moderate drought stress22.134

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain12.840
DRR006520Root Summer glycyrrhizin high producing strain12.743
DRR006521Root Winter glycyrrhizin high producing strain4.566
DRR006522Root Winter glycyrrhizin high producing strain4.167
DRR006523Root Summer glycyrrhizin low producing strain16.109
DRR006524Root Summer glycyrrhizin low producing strain14.182
DRR006525Leaf Summer glycyrrhizin high producing strain16.921
DRR006526Leaf Summer glycyrrhizin high producing strain16.361

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)49.161
SRR2868004Drought Stress(Tissue:root)29.865
SRR2967015Control (Tissue:root)28.992

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave13.930
SRR9715740Leave15.586
SRR9715741Leave15.022
SRR9715739Root37.289
SRR9715742Root18.587
SRR9715743Root22.334

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h9.061
SRR8749028MeJA induced 9h6.665
SRR8749029MeJA induced 9h5.740
SRR8749030Uninduced1.821
SRR8749031Uninduced0.607
SRR8749032Uninduced1.822

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root65.381
SRR8400027Control-Root66.240

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved