Gene detail information of Glyur000206s00012596.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G42280.14.00E-47basic helix-loop-helix (bHLH) DNA-binding superfamily protein
NRXP_007162279.11.42E-119hypothetical protein PHAVU_001G138600g [Phaseolus vulgaris]
Swissprottr|Q66GR3|BH130_ARATH1.00E-57Transcription factor bHLH130
trEMBLtr|V7CY23|V7CY23_PHAVU5.00E-120Uncharacterized protein {ECO:0000313|EMBL:ESW34273.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00206208345211280+


Gene family

Gene familysubfamily
Transcription Factors FamilybHLH


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

molecular_function

GO:0046983  protein dimerization activity



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000206s00012596.1PF00010.21HLH2653104.60E-09


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control15.537
SRR1783600control15.549
SRR1783602moderate drought stress20.562
SRR1811619moderate drought stress20.490

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain14.517
DRR006520Root Summer glycyrrhizin high producing strain13.940
DRR006521Root Winter glycyrrhizin high producing strain40.475
DRR006522Root Winter glycyrrhizin high producing strain38.610
DRR006523Root Summer glycyrrhizin low producing strain22.078
DRR006524Root Summer glycyrrhizin low producing strain21.608
DRR006525Leaf Summer glycyrrhizin high producing strain1.793
DRR006526Leaf Summer glycyrrhizin high producing strain1.818

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)18.149
SRR2868004Drought Stress(Tissue:root)26.369
SRR2967015Control (Tissue:root)27.632

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave9.825
SRR9715740Leave7.365
SRR9715741Leave12.307
SRR9715739Root1.797
SRR9715742Root9.898
SRR9715743Root7.366

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h10.686
SRR8749028MeJA induced 9h18.483
SRR8749029MeJA induced 9h14.020
SRR8749030Uninduced17.390
SRR8749031Uninduced23.018
SRR8749032Uninduced16.752

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root18.915
SRR8400027Control-Root17.702

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved