Gene detail information of Glyur000207s00015919.2


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G39160.15.00E-36Homeodomain-like superfamily protein
NRKHN35137.10Transcription factor TFIIIB component B'' [Glycine soja]
trEMBLtr|K7LMF8|K7LMF8_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA11G01285.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00207230205238664+


Gene family

Gene familysubfamily
Transcription Factors FamilyMYB-related


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006359  regulation of transcription from RNA polymerase III promoter


cellular_component

GO:0000126  transcription factor TFIIIB complex


molecular_function

GO:0001026  TFIIIB-type transcription factor activity

GO:0003677  DNA binding

GO:0003682  chromatin binding

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000207s00015919.2PF00249.26Myb_DNA-binding4645072.20E-09


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control10.537
SRR1783600control10.519
SRR1783602moderate drought stress14.203
SRR1811619moderate drought stress14.087

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain17.811
DRR006520Root Summer glycyrrhizin high producing strain17.306
DRR006521Root Winter glycyrrhizin high producing strain15.480
DRR006522Root Winter glycyrrhizin high producing strain15.345
DRR006523Root Summer glycyrrhizin low producing strain17.092
DRR006524Root Summer glycyrrhizin low producing strain17.409
DRR006525Leaf Summer glycyrrhizin high producing strain12.841
DRR006526Leaf Summer glycyrrhizin high producing strain12.381

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)19.929
SRR2868004Drought Stress(Tissue:root)20.185
SRR2967015Control (Tissue:root)20.098

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave9.736
SRR9715740Leave19.379
SRR9715741Leave18.240
SRR9715739Root1.207
SRR9715742Root8.425
SRR9715743Root6.604

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h35.816
SRR8749028MeJA induced 9h37.962
SRR8749029MeJA induced 9h28.075
SRR8749030Uninduced25.998
SRR8749031Uninduced44.182
SRR8749032Uninduced26.761

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root18.316
SRR8400027Control-Root15.469

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved