Gene detail information of Glyur000208s00014292.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G34210.10somatic embryogenesis receptor-like kinase 2
NRXP_004496399.10PREDICTED: somatic embryogenesis receptor kinase 2-like [Cicer arietinum]
COGYP_004092358.16.00E-21serine/threonine protein kinase with PASTA sensor(s) [Ethanoligenens harbinense YUAN-3]
Swissprottr|Q94AG2|SERK1_ARATH0Somatic embryogenesis receptor kinase 1 (Precursor)
trEMBLtr|I1NH81|I1NH81_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA20G31320.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00208183029189488+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.12.2


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005515  protein binding

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000208s00014292.1PF08263.7LRRNT_226651.50E-10
Glyur000208s00014292.1PF00560.28LRR_1931150.045
Glyur000208s00014292.1PF00560.28LRR_11661830.043
Glyur000208s00014292.1PF00069.20Pkinase3035723.80E-44


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control26.317
SRR1783600control26.516
SRR1783602moderate drought stress23.551
SRR1811619moderate drought stress23.351

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain32.114
DRR006520Root Summer glycyrrhizin high producing strain31.608
DRR006521Root Winter glycyrrhizin high producing strain8.770
DRR006522Root Winter glycyrrhizin high producing strain8.502
DRR006523Root Summer glycyrrhizin low producing strain40.378
DRR006524Root Summer glycyrrhizin low producing strain40.839
DRR006525Leaf Summer glycyrrhizin high producing strain12.122
DRR006526Leaf Summer glycyrrhizin high producing strain12.098

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)72.757
SRR2868004Drought Stress(Tissue:root)71.717
SRR2967015Control (Tissue:root)74.900

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave18.904
SRR9715740Leave21.018
SRR9715741Leave20.684
SRR9715739Root16.264
SRR9715742Root29.651
SRR9715743Root27.983

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h109.725
SRR8749028MeJA induced 9h94.121
SRR8749029MeJA induced 9h65.074
SRR8749030Uninduced73.470
SRR8749031Uninduced32.190
SRR8749032Uninduced25.126

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root59.165
SRR8400027Control-Root69.962

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved