Gene detail information of Glyur000209s00013475.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G22640.1 | 1.00E-46 | myb domain protein 3 |
| NR | XP_003555449.1 | 1.90E-93 | PREDICTED: transcription factor TT2-like [Glycine max] |
| Swissprot | tr|P10290|MYBC_MAIZE | 3.00E-56 | Anthocyanin regulatory C1 protein |
| trEMBL | tr|I1NHJ3|I1NHJ3_SOYBN | 7.00E-94 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA20G32500.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00209 | 175571 | 176782 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | MYB |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000209s00013475.1 | PF00249.26 | Myb_DNA-binding | 14 | 61 | 3.40E-15 |
| Glyur000209s00013475.1 | PF00249.26 | Myb_DNA-binding | 67 | 112 | 1.10E-15 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.000 |
| SRR1783600 | control | 0.000 |
| SRR1783602 | moderate drought stress | 0.194 |
| SRR1811619 | moderate drought stress | 0.192 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.691 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.673 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.563 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.565 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.764 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.851 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 0.354 |
| SRR2868004 | Drought Stress(Tissue:root) | 0.355 |
| SRR2967015 | Control (Tissue:root) | 0.264 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.000 |
| SRR9715740 | Leave | 0.000 |
| SRR9715741 | Leave | 0.000 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.075 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.023 |
| SRR8400027 | Control-Root | 0.192 |