Gene detail information of Glyur000210s00014429.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G23050.1 | 3.00E-62 | indole-3-acetic acid 7 |
| NR | AFK36086.1 | 9.93E-114 | unknown [Lotus japonicus] |
| Swissprot | tr|P13089|AUX28_SOYBN | 8.00E-112 | Auxin-induced protein AUX28 |
| trEMBL | tr|I3S744|I3S744_LOTJA | 4.00E-114 | Auxin-induced protein {ECO:0000256|RuleBase:RU004549} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00210 | 1584 | 8643 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | AUX/IAA |
| EAR motif-containing Proteins | AUX/IAA |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000210s00014429.1 | PF02309.11 | AUX_IAA | 7 | 234 | 9.10E-72 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 23.462 |
| SRR1783600 | control | 23.673 |
| SRR1783602 | moderate drought stress | 30.465 |
| SRR1811619 | moderate drought stress | 30.583 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 31.383 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 31.505 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 2.157 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.199 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 43.710 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 44.404 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 8.146 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 7.986 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 13.673 |
| SRR2868004 | Drought Stress(Tissue:root) | 12.870 |
| SRR2967015 | Control (Tissue:root) | 10.265 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 11.698 |
| SRR9715740 | Leave | 7.576 |
| SRR9715741 | Leave | 10.595 |
| SRR9715739 | Root | 5.533 |
| SRR9715742 | Root | 22.447 |
| SRR9715743 | Root | 20.008 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 10.761 |
| SRR8749028 | MeJA induced 9h | 5.054 |
| SRR8749029 | MeJA induced 9h | 8.445 |
| SRR8749030 | Uninduced | 4.873 |
| SRR8749031 | Uninduced | 3.836 |
| SRR8749032 | Uninduced | 5.821 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 23.305 |
| SRR8400027 | Control-Root | 34.715 |