Gene detail information of Glyur000210s00014438.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G30590.1 | 5.00E-62 | WRKY DNA-binding protein 21 |
| NR | KHN32331.1 | 0 | Putative WRKY transcription factor 21 [Glycine soja] |
| Swissprot | tr|O04336|WRK21_ARATH | 2.00E-120 | Probable WRKY transcription factor 21 |
| trEMBL | tr|V7BGP8|V7BGP8_PHAVU | 0 | Uncharacterized protein {ECO:0000313|EMBL:ESW16695.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00210 | 64222 | 66824 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | WRKY |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000210s00014438.1 | PF10533.4 | Plant_zn_clust | 248 | 294 | 3.70E-16 |
| Glyur000210s00014438.1 | PF03106.10 | WRKY | 298 | 356 | 1.40E-28 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 21.267 |
| SRR1783600 | control | 21.375 |
| SRR1783602 | moderate drought stress | 28.456 |
| SRR1811619 | moderate drought stress | 28.238 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 27.761 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 27.315 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 3.018 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.989 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 23.538 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 23.706 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.158 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.115 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 7.540 |
| SRR2868004 | Drought Stress(Tissue:root) | 5.457 |
| SRR2967015 | Control (Tissue:root) | 6.648 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 2.841 |
| SRR9715740 | Leave | 5.155 |
| SRR9715741 | Leave | 3.488 |
| SRR9715739 | Root | 4.016 |
| SRR9715742 | Root | 9.630 |
| SRR9715743 | Root | 7.394 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 10.880 |
| SRR8749028 | MeJA induced 9h | 6.768 |
| SRR8749029 | MeJA induced 9h | 5.962 |
| SRR8749030 | Uninduced | 1.272 |
| SRR8749031 | Uninduced | 0.044 |
| SRR8749032 | Uninduced | 0.220 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 9.181 |
| SRR8400027 | Control-Root | 9.217 |