Gene detail information of Glyur000210s00014452.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G43540.1 | 5.00E-10 | C2H2 and C2HC zinc fingers superfamily protein |
| NR | XP_006595353.1 | 1.46E-37 | PREDICTED: transcriptional regulator SUPERMAN-like [Glycine max] |
| Swissprot | tr|Q9SR34|TAC1_ARATH | 1.00E-11 | Transcriptional regulator TAC1 |
| trEMBL | tr|V7BIU7|V7BIU7_PHAVU | 2.00E-36 | Uncharacterized protein {ECO:0000313|EMBL:ESW16923.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00210 | 154711 | 155223 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.390 |
| SRR1783600 | control | 0.373 |
| SRR1783602 | moderate drought stress | 1.630 |
| SRR1811619 | moderate drought stress | 1.704 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.276 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.181 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 7.822 |
| SRR2868004 | Drought Stress(Tissue:root) | 14.665 |
| SRR2967015 | Control (Tissue:root) | 11.012 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.000 |
| SRR9715740 | Leave | 0.740 |
| SRR9715741 | Leave | 1.075 |
| SRR9715739 | Root | 0.084 |
| SRR9715742 | Root | 0.241 |
| SRR9715743 | Root | 0.090 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.047 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 1.910 |
| SRR8400027 | Control-Root | 0.899 |